| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02473 |
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| Symbol | RSp1071 |
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| ID | 1223383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1351770 |
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| End bp | 1354316 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637240936 |
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| Product | putative hemagglutinin-related protein |
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| Protein accession | NP_522632 |
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| Protein GI | 17549292 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.335971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.337547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGCCA ACGCGAGCGC CTCGCGCGGC AAGGGCGAGG GCTCGGACGT GAGCTGGACG
AACACGCACG TGTCGGCCGG CAACACGCTG ACGCTGGAGT CGGGCGGCAA CACGAACCTG
AAGGGGGCGG TGGCCACGGG CAAGCAGGTG GTGGCCAACG TGGGCGGCGA CCTGAACATC
GAAAGCCTGC AGGACACGAG CACGTACCAC ACCAAGGACC AGTCGATCGG CGGCAGCGTG
ACGGTGGGCT TCGGCTTCTC GGGCAGCGCG AACTTCAGCC AGCAGAAGAT CGACAGCGAC
TTCGCCAGCG TGACGGAGCA GTCGGGCATC AAGGCCGGCG ACCGAGGCTT CCAGGTCAAT
GTGCACGGCA ACACCGACCT GAAGGGCGCG GTGATCGCGA GCACCGACAA GGCGGTGCAG
GACGGCGCCA ACAGCCTGAC GACGGCGACG CTCACGCAGA GCGAGATCCA CAACCGTGCC
GAGTACAGCG CGAGCAGCAT CGGCATCGGC GGCGGCTACA GCTCTGGCGG TGGCAGCGGC
AAGAGCGACA ACAGCGGTGG CAAGGGCGCT AGCGCGGACG GCGTCGGCAC CAACCAGCAA
GGCCAGGCCA CCACGGGCGG CGACAAGGTG CCGGGCAGCA ACGCGCCGAC CAGCGGCAAC
TGGAGCGCCA CGCCACCGGT CGTGATGGGT GCGTCGGGCA GCGGCAGCAG CGTGACGGGC
AGCGGCATCA GCGGCGGCGC GATCCACATC ACGGATGGCG CGAAGCAGCA GGCGCTGACG
GGCAAGGACG CCGAGCAGAC GGTGGCGAGC GTCAACCGGG GGGTGTCGAG CGAGCGGGAT
AGCAGCAATG CGCTCAAGCC GATCTTCAAT GAGAAGGAGA TTCAGGCGGG GTTCGAGATC
GTTGGCGCGT TGCAGCGGGA GGCTGGAACG TTCCTGAGCA ACCGCGCGAA GGAAGTGGAC
CAGAAGAACG CTCAGGCCAA GGATGCGGAC GCAAAGGCAG CCGACCCCAG CAATGGCCTG
ACCGACGAGC AGCGTCTTGC ACTGCGCGAC CAAGCCTCGG CGCTGCGCTC GGAAGCGCAA
GCGATCAATG ACAAGTGGGG CGCGGGCGGC ACCTATCGCC AGATCACCTC GGCGCTGATG
GCCGGCGTTG GCGGCAACGT GACGGGCAGC ACGGCACAGT TCGCGCAGAA CATGGTGGTC
AACTATGTGC AGCAGCAGGG GGCGAGCTAC ATCGGCAAGC TGGTCGCGGA CGGCACGCTG
GTCGAAGGCA GCCCGGCCCA CGCCGCGTTG CATGCGATCG TCGCCTGCGC GGGTGCGGCG
GCGAGCAGTC AGAGTTGCGG CTCGGGTGCG CTGGGTGCGG CGGCGAGCAG CTTGCTGACC
GGCCTGTTCA GCGAAACCAG CCCGGACGAG ACCGCCACGC AGCGCGAGGG CAAGCGCAAT
CTCATCACCA GCCTGGTGAC CGGCATCGCC GCCATGAGCG GCGCGGATGC CACCACGGCG
ACCAACGGCG CCATCGCTGC GGTTGATAAC AACTGGCTGG CGACGCAGCA GATCGTGAAG
ATGAAGAAGG AGCTGTCCAA CGCGAAGTCG ACGCTGGAGC AGTTGAAGGT GGCCAGCAAG
TGGGCCTACA TCTCGACGAA GCAGGATGTG CTGACCACCA CGGGCATCGG CAAGGGGCTG
GCGGAGTCGG GCTGGAACGA CGTCAAGGGC GTGGCGGAAT TCCTGGCGCA CCCGATTGAG
GGGCTGAAGG GGCTGAAGCA ACTGATCAGC AGCCCGGATG CCCGGCAGCA GTTGGGTGAT
GCGCTGTTCA AAGAGTTGGA CGCCAAGATC GACCGCATGA GCTACGCCAT CGAAAAGGGT
GGCGATGAGA ATGCGGAGCA GCTTGGCAAG GACTTGGGCG GGCTGCTGTG GCAGGTGGGC
AGTGTTGTGA CCGGCGTGGG CGGGGTTGCG AAGGGGGCAA CCAAGCTGGC CTCAGTGGGT
GTCCGTCTTG GCACCGACAT GATGGAAACG CTGTCCGGTG CAGCGAAGTT CGATCGCCTG
CTTGCCAATG GTGGATTGTT CGCTGCAGAT GGCAAGCCTC TGATGGACTT CCGGAGTTTG
AGCAATCCGC AGAAGAGTAT TGTGGGTGAC ATGCTGGGTG GCGAAAAGGT TAAGCAGCTA
CTGCCGGATG CTCAGAAAAT TGGTCGAACC CCAGGCGTTG GTGAAGCCGG CATTGATGAT
CTCTACAAGG TCAATAAGCC GGGTGTGGAT TACGTAGTCG TAGAATACAA ATTTGGCTCA
TCTAAGCTGG GTAATCCAGC AGATGGTTTG CAGATGAGTG ATGATTGGAT TACAGGAGCG
AAAACAGGCA AGAGTCGTGT TCTCGATTCA TTGAGTGGTG ATAGGGTTGA GGCAGGAAAA
TTTATGGATG CATTTGATGC CGGGCGAGTT GAGAAGTGGC TGGTCCATAC AGATCCCTTC
GGAAACGTCA CCGTAGGTGT GCTAGATAAG AACGGGAAAT TTTTCCCCGA TCCCGTCAAG
GCATCGAAAA TTCTAGGATC AAAATGA
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| Protein sequence | MTANASASRG KGEGSDVSWT NTHVSAGNTL TLESGGNTNL KGAVATGKQV VANVGGDLNI
ESLQDTSTYH TKDQSIGGSV TVGFGFSGSA NFSQQKIDSD FASVTEQSGI KAGDRGFQVN
VHGNTDLKGA VIASTDKAVQ DGANSLTTAT LTQSEIHNRA EYSASSIGIG GGYSSGGGSG
KSDNSGGKGA SADGVGTNQQ GQATTGGDKV PGSNAPTSGN WSATPPVVMG ASGSGSSVTG
SGISGGAIHI TDGAKQQALT GKDAEQTVAS VNRGVSSERD SSNALKPIFN EKEIQAGFEI
VGALQREAGT FLSNRAKEVD QKNAQAKDAD AKAADPSNGL TDEQRLALRD QASALRSEAQ
AINDKWGAGG TYRQITSALM AGVGGNVTGS TAQFAQNMVV NYVQQQGASY IGKLVADGTL
VEGSPAHAAL HAIVACAGAA ASSQSCGSGA LGAAASSLLT GLFSETSPDE TATQREGKRN
LITSLVTGIA AMSGADATTA TNGAIAAVDN NWLATQQIVK MKKELSNAKS TLEQLKVASK
WAYISTKQDV LTTTGIGKGL AESGWNDVKG VAEFLAHPIE GLKGLKQLIS SPDARQQLGD
ALFKELDAKI DRMSYAIEKG GDENAEQLGK DLGGLLWQVG SVVTGVGGVA KGATKLASVG
VRLGTDMMET LSGAAKFDRL LANGGLFAAD GKPLMDFRSL SNPQKSIVGD MLGGEKVKQL
LPDAQKIGRT PGVGEAGIDD LYKVNKPGVD YVVVEYKFGS SKLGNPADGL QMSDDWITGA
KTGKSRVLDS LSGDRVEAGK FMDAFDAGRV EKWLVHTDPF GNVTVGVLDK NGKFFPDPVK
ASKILGSK
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