Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02374 |
Symbol | RSp1037 |
ID | 1223349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1313159 |
End bp | 1313647 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637240902 |
Product | hypothetical protein |
Protein accession | NP_522598 |
Protein GI | 17549258 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.861023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0466865 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCG TCCCGCTTTC ACCGCTCACC CGCATCCGCA CCACGCTCGA CCGCCTGGCC GGTCCGCAAA GCGGACTGTG CGCGCTGATC CTGCTGATCG CCCGCGCGTA TCTCTTCTAT GTGTTCTTCC GCTCGGGCCT GACCAAGCTG CACGACTGGC CGACCACCGT GCTGCTCTTC AGCGAGGAAT ACAAGGTGCC GCTGCTGCCG CCCGCGCTGG CCGCCGCCCT CGGCACCTTC GGCGAACTGG TGTTCCCGTC GCTGATGCTG ATCGGCATCG TGCCCCGGCT GGCCGCGGCG GGGCTGTTCT TCGTCAACCT GGTCGCGGTC GGCTCGTACT GGGCCAGCCT GTCGGCGTCG GCGGTGGAGT TTCACTTCGT GTGGGGCGTG CTGATCGCCA TCGTGGCGAC GGTGGGGCCG GGCCGGCTGA CGCCGCAGAC GCTGTGGCAG CGCAAACGCC GGCGTGCGGC GCAGGGCCAC GCTTACTGA
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Protein sequence | MNTVPLSPLT RIRTTLDRLA GPQSGLCALI LLIARAYLFY VFFRSGLTKL HDWPTTVLLF SEEYKVPLLP PALAAALGTF GELVFPSLML IGIVPRLAAA GLFFVNLVAV GSYWASLSAS AVEFHFVWGV LIAIVATVGP GRLTPQTLWQ RKRRRAAQGH AY
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