Gene RS02174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS02174 
SymbolRSp1617 
ID1223929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand- 
Start bp2034556 
End bp2035185 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content68% 
IMG OID637241480 
Producthypothetical protein 
Protein accessionNP_523176 
Protein GI17549836 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.545726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0735933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCC ATGATCTGCT GCCGCGGGCG GAAGCCCTCT TCCGCGAACT CGACGGCATG 
CCGCTTGCGG AGAAAGTGGC CGCGCTCAAC GCGCTGCGCC GGATCCTGCA TGCGCACAGC 
CCGTTTCGCG ATGAGCCGAC CGACTGCGTG CAATGGGTGC AGGGGGACCT GGTGCATGGC 
AACACGTACA ACCCGAACGA GATCGCGCCG CCGGAGATGG CGCTGCTGGA GCGCTCGATC 
CGGGCCGATG GCTACACGCA GCCGATCGTC ACGCATCGCG CGCCGCTGTA TTTCGAGGTG 
GTGGACGGCT TTCATCGCCA GCGCATCGGC ACGGAGTCGG TGGCGATCCG CGCGCGGCTG 
CACGGCTACC TGCCGATCGT GGCGATCCGG GCCGATCGGG GCGGCGTCGA CGATCGCATC 
GCGGCGACGA TCCGGCACAA CCGCGCGCGC GGCGTGCACG GCGTGCGCCC GATGACCGAG 
GTCGTGATCG CCCTGCTGCG CGCGGGGTGG AGCGATAGCG ACGTCGCCGC GGAACTGGGG 
ATGGACAGCG AAGAAGTCTT CCGCTTCAAG CAGGTCTCGG GCCTGCCGGA GCTTTTCCGG 
GATCGCCCCT ACTCCATGTC ATGGGATTGA
 
Protein sequence
MKPHDLLPRA EALFRELDGM PLAEKVAALN ALRRILHAHS PFRDEPTDCV QWVQGDLVHG 
NTYNPNEIAP PEMALLERSI RADGYTQPIV THRAPLYFEV VDGFHRQRIG TESVAIRARL 
HGYLPIVAIR ADRGGVDDRI AATIRHNRAR GVHGVRPMTE VVIALLRAGW SDSDVAAELG 
MDSEEVFRFK QVSGLPELFR DRPYSMSWD