| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02155 |
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| Symbol | RSp1598 |
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| ID | 1223910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 2005379 |
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| End bp | 2006644 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637241461 |
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| Product | putative transport transmembrane protein |
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| Protein accession | NP_523157 |
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| Protein GI | 17549817 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.58284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACC AAACCTCCGG TACGCATTCC GGGCACCTGG CCGAAGGGCC GCCGCACCAC
GTCGTCACGG TCGACCCGAT CGAGCCGGTC GACCGTTCCC GCGCGATGCG ACGCGCGCGC
TGGGTGCTGA TCGTGGTGGC GGTGCTGCTG GCGCTGGGCG CCGTCCGCAC GCTGGTGAGC
CGCTACGACA ACGCGCACGC GCTGGAGCGC CAGATGGCCT CGCAGGCCAC GCGCTACGTG
AACACCGTCG CGCCCAGGCC CGCCGCCGGC AACCGCGAGC TGACGCTGCC CGGCACGCTG
CAGGGCTTTG TCGAATCGCC CATCTATGCG CGCACCAGCG GCTATGTGCT GCGCTGGTTC
AAGGACATCG GCGCGCACGT CGAGAAGGGC GAGGTGCTGG CGCTGCTCGA CACCCCCGAA
GTGGACCAGG AGCTCAACCA GGCCCAGGCC GCGCGCAACC AGGCCGCCGC CCGCCGCGCG
CTGGCGCAGA CCTCGCTCAC GCGCTGGCAG AGCCTGCGGC AGAAAGACGC CGTCTCGCAG
CAGGAGCTGG ACGAACGCAC CAGCGCCGCC AACCAGGCCC AGGCCGACCT TGCCGCCGCC
GAGGCCAACG TGCGCCGGCT GCAGGAGCTG CAGGGCTTCC GCCGCATCGT GGCGCCGTTC
GCGGGCGTGG TCACCAAGCG CAATGTCGAT GTCGGCACGC TGGTCAACGC GGGCAACGCC
GGCGCCAACC GCGAGCTCTT CACGCTGGCG CAGACCGATC CGCTGCGCAT CTACCTGTAC
GTGCCGCAGG CGTATTCGCA GCAGGTGAAG GTCGGCCAGG ATGTGGCGGT CACGCTGGCC
GAGCTGCCCG GACAGGTCTT CCATGGCGCC ATCGCGCGCA TGTCGAGCGC GATCGACCCG
GCCACCCGCA CCATGCAGGT CGAAGTGTCG CTGCCCAACC AGGCAGGCCG CCTGCTGCCC
GGCGCCTATG TGCAGGCGCA GATCGCCGGC AAGGCCGCGG ACGATCCGCA GACGGCGTTC
GTGGTGCCGA CCAACACGCT GCTGTTCCGC AAGGAAGGCC CGCGCATCGC CGTGGCCGAG
AACGGCCGCG TGAACCTGCG CCCGGTCACC ATCGGCCGCG ACTATGGCCG CACGGTCGAG
ATCCTCTCGG GCCTGCAGGC CGGCGACGCG CTGATCCTCA ACCCGGCCGA CTCGATCGAG
CAGGGCGAGG CGGTCACCGT CACGCCGGCC TCGGCACCGG CGGCTTCCGC GCCGCACGCG
TCATGA
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| Protein sequence | MPDQTSGTHS GHLAEGPPHH VVTVDPIEPV DRSRAMRRAR WVLIVVAVLL ALGAVRTLVS
RYDNAHALER QMASQATRYV NTVAPRPAAG NRELTLPGTL QGFVESPIYA RTSGYVLRWF
KDIGAHVEKG EVLALLDTPE VDQELNQAQA ARNQAAARRA LAQTSLTRWQ SLRQKDAVSQ
QELDERTSAA NQAQADLAAA EANVRRLQEL QGFRRIVAPF AGVVTKRNVD VGTLVNAGNA
GANRELFTLA QTDPLRIYLY VPQAYSQQVK VGQDVAVTLA ELPGQVFHGA IARMSSAIDP
ATRTMQVEVS LPNQAGRLLP GAYVQAQIAG KAADDPQTAF VVPTNTLLFR KEGPRIAVAE
NGRVNLRPVT IGRDYGRTVE ILSGLQAGDA LILNPADSIE QGEAVTVTPA SAPAASAPHA
S
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