| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02144 |
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| Symbol | RSp1585 |
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| ID | 1223897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1988766 |
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| End bp | 1991357 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637241448 |
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| Product | putative RHS-related transmembrane protein |
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| Protein accession | NP_523144 |
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| Protein GI | 17549804 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCTGG GAAAGCAGCT GTGCCCTGCT TTTTCCGCAG TTTGGCGCCG AGCGCGGTTT
GGTTTGAGGG GCTGGCGGTT CTGTGTGGCA ATAGCCTTGT TTGGTTGCCT TACACCCTCT
GCCTGGAGCG CCAATACGGG TGCTGACGGG AACGTTTGGA GGGCAGAGAA CAATGGCGAG
TGGTGGGGGG CTGGTGATAG TCCGGATGCC GCATGTCGAT CGGCGACCGC CGGCTTCAAA
GCTCGATATC CCTGGGATAC GCGAGAGTAT CTCTACCTTG AGAACAAGCA AATCAATGCC
CCCGGCACTG CAGGATGCAT AGGGCGATTC AGCAATGGCG TTCTCGGGAT CATTGGGACA
ACAGTACGAA TTGGTCAATG CGCGGCGGGC TATTTGACGC AGCCGGACGG CTCGTGCGCA
CCTAAGAACC CGGAGGTAAA GACCTGCGCT GTAGGCCATC CCGTGTTCCC GAATACGGGC
GTAAAGGTAC TGATGGAGCG AGATGACGCA GGCAGTGCAG ATTTACCCCT CTCGCGCACA
TATCGGTCAT CTGTGCTTTT CGGTCTGGTC ACCGGCGTGG GCCAATGGCT GTTCAACTGG
CAGCGAGAGT TGGACGCTCC CATTGGCACC GCTGGCAATA CGTCCGCTCC GATCACGGCA
ATGCGCGAGG ACGGCACCTC GCGCGTTTTT CGCAAGAGCG GCAGTACTTG GACCACGTTC
GGCTCCCGAG ACACGGTAGC TGGTCTGTCT GATGGGGCCG GCACGCTCAC TGGCTGGCAA
TACACCGTCG CTGAAACAGG CGCCGTGGAA ACCTACGGAA CGAATGGGAA GCTGCTGTCC
GTTCGAGAGC GGAATGGAAG AACCACGACA CTGATCTATA GCCCGAGTCA TCAACTGATG
CAGGTTACGG CGCCTACAGG CCGTAAGTTG ACCTTTGCCT ATGACCTGCA AGGGCGAATC
ATCAGTATCA CGGCACCCGA TGGTGCCATC ACGCAGTACG CATATAACGC CAACGGCATG
CTCACCGCCG TTACCTGGCC CGGCAATGTC ACTCGCCAGT ACGTTTACGA AGATGCCCGC
TTTCCCACCG CGCTGACAGG CGTGATCGAC GAGGCTGGCG TGCGGTATGC CACGTATGCC
TATGACGATC AGGGGCGCGC CATAACGAGC GAGCTGACTG GCGGGACAGA TCGGTATCAG
TTTCAGTATC AGACAAATGG GCAGACTACG GTCTTGACAC CGGATGGTGG AAGCAGTGTC
TATAGCTTCC TGAAGCAAAA CGGCGTGTTG CTGCCGACAA GAGTAAGTGC ACCATGTCCC
TTGTGCGGCA GTACGGCGCA GAGCGCGGAC TACGACACCA GTGGGAATGC GACGAGTAAG
GTTGGCTATG ACGGCGGAAC TACGACATAT GCCTATGATG CTCAAGGGCG AGAAACGCAA
CGTGTGGAAG CGGCTGGCAC ACCAAACGCT AGAACGATCA CAACGGAGTG GCACCCCACA
TGGCGTTTGC CAACAAAGAT CGCATCCCCA GGGCGCATCG ACGGCTTCAC CTACGACGAC
AAGGGTCAAC TGAAAGACTA CGCCTGGTTT CCGACCAGCG ACGTCGACGG TAACCAAGGC
ACAGCCGCCA TCCGCAACGG ATCAATAACC AACTCCGGGT GGACGTACAA CGATGCCGGG
TTGGTGATTG CTGCGGTGGA AATGCTCGAT GATACTGTGA CCGGTTCGTG GGCATTCACG
TACGACGATC AAGGCAATTT GCTGACGTTG ACCAATGCAG CCGGCAAGGT TGGCAAGGCG
TTGCAGTACG ACGGCGCTGG GCGCTTGCTT GAGGCAATCA ATACTGACGG TCAGCACATT
CGCTATCAGT ACAACGCCCG GGGCAATGTA GTTTTGTACG AAAGGGACAG TCAAACCGTA
ACATATGAGT ACAGCCCAGT CGGTTTTCTG ACGACCGTTA AGGGGCCGGG CGCAAGCTAT
CTTGGGTATG AATATGATGC TCAGCACCGG CTGGTGGCGA CACTTCAACC GCAGGATGCA
GTTTCAACTA CGGCTGCAAG TCCATTCGGC ACCACTTCAT CGAATAGTGC AGCGGATGCC
CAAAGTCAGG ATCTTTGGAC AGAGCTATGG ACATGGCTAA AGGCTTGGCT GGGTTCCTGG
ATCAGTGATG CGCATGCTCA ACAAGTAGTC CTGATTCGAA CGCCCATTCC TGCGCCGGCA
CCCGGGCAAA GCCAAGCCAG CTTGAACAAC AGAGGTGATC CTGCAGATGC GTTGGAACAG
AATGCGGGGC GTCGACGCGA TCCGAGAGCG GCGCTGCTAG CCAGCATTAT TGCCAGCGCC
CATAACCTAC TGGAAATCAT TCGCAACGTT GTGTCTACTG ACGCAGAAAC CGCGACATGT
GGCCGTGACA AAGAATGTGA ACAACGGTTG GATGATGATC GATTTGAATG TGAACATACC
GCACGCCCAA AATTTGGTGT AGTCGGCGAA GCAATCTGCA AGGCATCGGC GACTCAACGA
TATGGCGAAT GCCTTCGATT CGGGCCGCAA GGAGTACGAA CACCTTTACA TGGAGTACAA
ACACCATTAT GA
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| Protein sequence | MVLGKQLCPA FSAVWRRARF GLRGWRFCVA IALFGCLTPS AWSANTGADG NVWRAENNGE
WWGAGDSPDA ACRSATAGFK ARYPWDTREY LYLENKQINA PGTAGCIGRF SNGVLGIIGT
TVRIGQCAAG YLTQPDGSCA PKNPEVKTCA VGHPVFPNTG VKVLMERDDA GSADLPLSRT
YRSSVLFGLV TGVGQWLFNW QRELDAPIGT AGNTSAPITA MREDGTSRVF RKSGSTWTTF
GSRDTVAGLS DGAGTLTGWQ YTVAETGAVE TYGTNGKLLS VRERNGRTTT LIYSPSHQLM
QVTAPTGRKL TFAYDLQGRI ISITAPDGAI TQYAYNANGM LTAVTWPGNV TRQYVYEDAR
FPTALTGVID EAGVRYATYA YDDQGRAITS ELTGGTDRYQ FQYQTNGQTT VLTPDGGSSV
YSFLKQNGVL LPTRVSAPCP LCGSTAQSAD YDTSGNATSK VGYDGGTTTY AYDAQGRETQ
RVEAAGTPNA RTITTEWHPT WRLPTKIASP GRIDGFTYDD KGQLKDYAWF PTSDVDGNQG
TAAIRNGSIT NSGWTYNDAG LVIAAVEMLD DTVTGSWAFT YDDQGNLLTL TNAAGKVGKA
LQYDGAGRLL EAINTDGQHI RYQYNARGNV VLYERDSQTV TYEYSPVGFL TTVKGPGASY
LGYEYDAQHR LVATLQPQDA VSTTAASPFG TTSSNSAADA QSQDLWTELW TWLKAWLGSW
ISDAHAQQVV LIRTPIPAPA PGQSQASLNN RGDPADALEQ NAGRRRDPRA ALLASIIASA
HNLLEIIRNV VSTDAETATC GRDKECEQRL DDDRFECEHT ARPKFGVVGE AICKASATQR
YGECLRFGPQ GVRTPLHGVQ TPL
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