| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02127 |
|---|
| Symbol | RSp1571 |
|---|
| ID | 1223883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 1973239 |
|---|
| End bp | 1974213 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637241434 |
|---|
| Product | transcriptional regulator transcription regulator protein |
|---|
| Protein accession | NP_523130 |
|---|
| Protein GI | 17549790 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGACA TCACCCGCGC CAAGATGCGG GTATTCCACG CGATTCTGGA GCACCGGTCC
GTGCGCAAGG CCGCGGATCA GCTGGAGATG AGCCGGTCCC TGGTGAGCCG GTACCTGACG
GAAATGGAAG ACATGATCGG CGGGCGCCTG TTCGACCGGA CGGCGACCGG GCTGATGCCC
ACCGATGCGG TGCCGTATCT GCTGGAATAT GCTCGCGGCA TGGAGGCCTC GCAGGAGAAG
CTGCTCGACC AGATGCACCA GCTCAGGAGC CTGCAGAAGG GCAATCTCCT GATTTCCCTG
AGCGAGGGGC TGGTCGATAC GCTGATGGAA GACGTATTGG CCGGCTTCAT GAAGAAATAT
CCCGGCGTGG AAGTCGTGCT GAACATGCGC GCCACGGCGG AGATCATCAA CGATGTCGCG
ACCAACGAGG CGCATATCGG GCTGGCCTAC AACCCGCCGA TGACCAGCGG CATCGCATTC
TGCGCAAGCG CCGTCCACCA TATCGTCGCG GCGGTGCACC CTGAGCACCC GCTCGCCCGG
TGCGACGATC CGGTCCCGCT CGCGCAGGCG CTGGCCTATC CGGTCGGCAT CATGCCGCCG
GCCTTTGGTC TCGGCCTGCT GATCCGCACC ATCGCGAAAG CGGAAAACCT CAACCTCACG
CCCAACTTCA ATGCCAACAC CCTGATGGCG CTGCGCGCTT ATGCGCGGCA CACCCGGGGC
GTGGCGTTCA TCACGGATTT CTCGATCCGC AAGGAAGTCG CGGCGGGGCT GCTGGTCGGC
GTCCCGCTCA AGCATCCGCT GGCGGAGAAC CAGTATGCGC GGGTGATGGT GAAGGAAGGG
CGACCGCTGC CGCGTGCCGC GCAGGAGGTC ATCAACAGCA TCAACGCCCA TCTGTCCACG
CTGACGAGCG ATCGGGTGAA CGATATGCGC GGCGGGCGCG GCTGGTTGCG GGTGGTGGAG
ACGGCCCGGA CCTGA
|
|---|
| Protein sequence | MYDITRAKMR VFHAILEHRS VRKAADQLEM SRSLVSRYLT EMEDMIGGRL FDRTATGLMP
TDAVPYLLEY ARGMEASQEK LLDQMHQLRS LQKGNLLISL SEGLVDTLME DVLAGFMKKY
PGVEVVLNMR ATAEIINDVA TNEAHIGLAY NPPMTSGIAF CASAVHHIVA AVHPEHPLAR
CDDPVPLAQA LAYPVGIMPP AFGLGLLIRT IAKAENLNLT PNFNANTLMA LRAYARHTRG
VAFITDFSIR KEVAAGLLVG VPLKHPLAEN QYARVMVKEG RPLPRAAQEV INSINAHLST
LTSDRVNDMR GGRGWLRVVE TART
|
|---|
| |