Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02027 |
Symbol | RSp0052 |
ID | 1222600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 57520 |
End bp | 58950 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637239911 |
Product | metabolite transporter |
Protein accession | NP_521613 |
Protein GI | 17548273 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.158134 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCCA CTTTCCCTGC TGCCGCGCAG GCGAACGCCG CCGCGCGGCT CGAACGCCTG CCGTTTTCCG GCTATCACAA GCGGATCTTC ATCATCATTG CGATCGCGTT CTTTTTTGAT TCCGTCGATC TGGCCACGAT GACATTCGTG CTCGGCTCGA TCAAAAAGGA GTTCGGGCTG TCCACCGCCA CGGCGGGCCT GGTGGCCAGC TCCAGCTTCT TCGGGATGGT GATCGGCGCG GCGGTTGCCG GGCTGCTCGC AGATCGGTTC GGGCGTCGGC CGGTGTTTCA GTGGAGCATG GTGCTGTGGG GCGTCGCGTC GTATCTGTGC TCGACCGCGC AGAGCGTGGA GGCGCTGATC GCCTGGCGGA TATTGCTCGG CATCGGCATG GGTATGGAGT TTCCGGTAGC GCAGACGCTC TTGTCCGAGT TCGTGCCGAC GGCAAACCGG GGGCGGCTGA TCGCGCTGAT GGATGGATTC TGGCCGCTGG GCTTCATCAC GGCGGGCATC GTGTCGTATT TCGTACTGCC GCAGTTTGGG TGGCGTGCGG TGTTTGCGCT GCTCGCGGTG CCGGCCATCT TTGTGTTGAT CGTGCGCCGC GCGGTGCCGG AATCGCCGCG CTGGCTGGAA CACGCGGGCC GCAATGCGCA AGCCGACACG GTCATGCGCG GCATCGAAGC CAAGGTGATG CGCTCGCTGA ACACCACAAC GCTGCCCCCG ATCGTTCAGC ATTCCGCGCC ACAACCGGTG CGCCGGCACA GCGCGTTGCG AGAAATCTGG AGCGCCGCGT ACCGCCGCCG CACGACGATG GTCTGGCTGC TATGGTTCTT TGCGCTGCTG GGCTTCTATG GTTTGACGTC GTGGCTGGGC GCGCTGCTGC AGCAGGCGGG TTTTGCGGTC ACGCAGTCGG TGTACTACAC GGTGCTGATC TCCCTGGGCG GCGTACCCGG CTTTCTGTGC GCAGCATGGC TGGTCGAGCG TTGGGGGCGC AAGCCAACCT GCATTGCATC GCTGCTGGGT GGTGGTGCCA TGGCTTACCT GTACGGCCAA AGTGCGCTGT ATGGCGGCAG CGTGACGCTG CTGATCTGCA CGGGCCTGGC CATGCAGTTC TTCCTGTTCG GCATGTGGGC GGTGCTGTAC ACCTACACGC CAGAGCAGTA CGGCACCGGC GCACGCGCAA CGGGCTCCGG CTTTGCCTCG GCTATCGGCC GGGTCGGCTC GCTGATCGGG CCTTACGTGG TGGGCGTGGT GCTGCCCGTG TTTGGCCAAG GCGGGGTGTT TACGTTGGGC GCCATCTCGT TTGCGGTTGC TGCGCTGGCG GTGTGGGCAC TCGGTATCGA GACCCGGGGG CTTGCTCTGG AGGCATTGGC TTCGGAGGAT GCGGCGGCTG AAACTGCGCC CTACTCAACC ACTGCAGACA ACATCTCCTA G
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Protein sequence | MPATFPAAAQ ANAAARLERL PFSGYHKRIF IIIAIAFFFD SVDLATMTFV LGSIKKEFGL STATAGLVAS SSFFGMVIGA AVAGLLADRF GRRPVFQWSM VLWGVASYLC STAQSVEALI AWRILLGIGM GMEFPVAQTL LSEFVPTANR GRLIALMDGF WPLGFITAGI VSYFVLPQFG WRAVFALLAV PAIFVLIVRR AVPESPRWLE HAGRNAQADT VMRGIEAKVM RSLNTTTLPP IVQHSAPQPV RRHSALREIW SAAYRRRTTM VWLLWFFALL GFYGLTSWLG ALLQQAGFAV TQSVYYTVLI SLGGVPGFLC AAWLVERWGR KPTCIASLLG GGAMAYLYGQ SALYGGSVTL LICTGLAMQF FLFGMWAVLY TYTPEQYGTG ARATGSGFAS AIGRVGSLIG PYVVGVVLPV FGQGGVFTLG AISFAVAALA VWALGIETRG LALEALASED AAAETAPYST TADNIS
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