Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02006 |
Symbol | RSp0031 |
ID | 1222579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 35950 |
End bp | 36597 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637239890 |
Product | hypothetical protein |
Protein accession | NP_521592 |
Protein GI | 17548252 |
COG category | [S] Function unknown |
COG ID | [COG3416] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.57644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCGC AAGAGCTGCA AGCGCTGGAG AGCTTCCTCG CCCAACTGAC GCAGGCCCAG GCCGGCACGA AGGACCCGCA GGCCGAAGCC CGCATCGCCG AGGCCGTCGC CAGGCAGCCG GACGCCGCCT ACCTGCTGGT GCAGCGCGCC ATGCTGCTTG ACCAGGCATT GGCCGGCGCC AAGACGCAGA TCGCCCAACT GCAAACCCGG CTGCAGACGG CGCAGGCCAC CGGCTCCGGC GCCTTCCTTG ACCCGGCAGG CACCTGGGGC CAGCACGCCG GCAGCACTCC GCCCCCGGCG ATGGCCTCCG CACCCGTGGC GCCGGCAGCG CAGCCATCCC GCTCCGGCTT CCTGGGCGAC GGCGTGCGCA GCACGCTCGG CAGCATCGCC ACCACGGCCG CCGGCGTCGC GGGCGGCGCC TTCCTGTTCC AGGGCATCGA GAGCCTGTTC CGCCACAACA GCGGGACCGG CTTCCTCGGC CAGCCGGCCA TGGGGATGCT GCCGACCGAG ACCACGGTCA TCAACAACTA CGACGATGAC CATGACGCGC CCGCGCTCCG CACCGACACG GCCTCGCGCG GCGACAGCCT GCTGGACACC AGCCTCGACG ACGGCAACTT CGCCGACGAC GATCCGTCGA TGTTCTGA
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Protein sequence | MTPQELQALE SFLAQLTQAQ AGTKDPQAEA RIAEAVARQP DAAYLLVQRA MLLDQALAGA KTQIAQLQTR LQTAQATGSG AFLDPAGTWG QHAGSTPPPA MASAPVAPAA QPSRSGFLGD GVRSTLGSIA TTAAGVAGGA FLFQGIESLF RHNSGTGFLG QPAMGMLPTE TTVINNYDDD HDAPALRTDT ASRGDSLLDT SLDDGNFADD DPSMF
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