| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01749 |
|---|
| Symbol | RSp0700 |
|---|
| ID | 1223007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 888221 |
|---|
| End bp | 889360 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637240560 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_522261 |
|---|
| Protein GI | 17548921 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1690] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03073] release factor H-coupled RctB family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.447388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.514599 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAATT GCATCCTGCA CCTGGCCGAC GGCGTCACCC TGATCGCCTC GGACAACACC
TGGATCGAAG GCAACACGAT CCAGCAACTT CAAACCACGG CAACACTCCC CGGCATGCGC
CATGTGGCCG GCATGCCCGA CCTGCACCCC GAACGCGGCT ATCCGGTGGG TGCCGCGTTC
TTCTCGGTCG GCCGGCTTTA CCCCGCGCTG ATCGGCAACG ACATCGGCTG CGGCATGGCG
CTCTGGGCCA CCGGCCTCGA TGCGAACAAG GCCCGCCTCG ATAAGCTCGA AAAGCGGCTC
GGCAATCTCG ACGGGCCGCT CGACGATGCC TGGGGCGAAC TGGCCACGGC GCTGGCGCCG
GCCGGCACGG GCTTCGATGC CGCGCTCGGC ACCATCGGCG GCGGCAACCA TTTCGCTGAG
CTGCAGCAGA TCGACACGGG CTATGACGAC GCAGCTGCGG ATGCGCTCGG GCTGCGCGCG
CGGCAGCTCC TGCTGCTGGT GCACAGCGGC TCGCGCGGGC TTGGCCAGGC CATCCTGGAC
GAACAGCTGG GCACGCACGG ACACGACGGG CTGCCGCAAG GCAGCCCCGA ATGCGCGGCC
TACCTGGCGC GGCACGATAC GGCGCTGCGG TTCGCCAAGG CCAACCGCGA ACTGATCGCG
CGACGCATGC TGGACCGCCT GCACACGCAG GGCCGGCCAC TGCTGGACGT GCACCACAAC
CTGGTGATGC CGGCGACCAT CGAAGGCGAA CCCGGCTGGC TGCACCGCAA GGGCGCCACG
CCATCGGATG CCGGGCCGGT GGTCATCCCA GGCTCGCGCG GCGACTTCAG CTACGTGGTC
GTGCCGCAGC CGAGCGAGCA CAGTCTCTTT TCGCTTGCGC ACGGCGCCGG CCGCAAATGG
ATGCGCAGCG AGTGCAAGGA CCGCCTGGCG CGGCGCTTCA GTCCGGCGCA GCTCAACCGG
ACCCGGCTGG GCAGCCATGT GATCTGCGAA GACAAGCAAC TGATCTACGA AGAAGCCCCC
GAGGCCTACA AGCCGGTCGA TAGCGTCATC GCGCCGCTGG AACAGGCGGG CCTGGTCAAG
GTGCTTGCGC GCCTGCGCCC GGTGCTCACC TACAAGACCC GCGGGGAGTG CTGCCGATGA
|
|---|
| Protein sequence | MGNCILHLAD GVTLIASDNT WIEGNTIQQL QTTATLPGMR HVAGMPDLHP ERGYPVGAAF
FSVGRLYPAL IGNDIGCGMA LWATGLDANK ARLDKLEKRL GNLDGPLDDA WGELATALAP
AGTGFDAALG TIGGGNHFAE LQQIDTGYDD AAADALGLRA RQLLLLVHSG SRGLGQAILD
EQLGTHGHDG LPQGSPECAA YLARHDTALR FAKANRELIA RRMLDRLHTQ GRPLLDVHHN
LVMPATIEGE PGWLHRKGAT PSDAGPVVIP GSRGDFSYVV VPQPSEHSLF SLAHGAGRKW
MRSECKDRLA RRFSPAQLNR TRLGSHVICE DKQLIYEEAP EAYKPVDSVI APLEQAGLVK
VLARLRPVLT YKTRGECCR
|
|---|
| |