| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01675 |
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| Symbol | RSp0904 |
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| ID | 1223211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1141334 |
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| End bp | 1143277 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637240764 |
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| Product | putative dehydrogenase oxidoreductase protein |
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| Protein accession | NP_522465 |
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| Protein GI | 17549125 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.871194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCA AGCCCGATTT CCTGATCGTA GGCAGCGGCG GAGGCGGCGG CACGATCGCC
TGGGTCTTGG CCAGCGCCGG CTACGACGTC CTGATCCTCG AGCAGGGCCG CAATCTGGCC
CAGCAACTGC GCAACCCCGT GCTGCCGTTC GATCCCGCGG TGCACGATGA AGAATTGTTC
CGCCTGAGAA AACCTGACCC CAAGCGGCGC TTGCGCGGCG ACTACAACAC CTTCCGGGAT
CTGGGCACCC GGGATCCCGC GCGCGCGTTC GACGGCGGCT GGACCGGCTC GGTGCTCGGC
GGCGGCTCGG TGCTGTGGGG CACGTGGTCG TTCCGCCCCC TGCCGATCGA CTTTCGCCTC
AAGACCTACT ACGAGCGTAC CGGGGAACTG GGGCAACTTC AGAAGGAGGG CTACAACGTC
GCCGATTGGC CGCTGGCATA CCAGGAGATG ATGCCGTACT TCCACGTCGC CGAGACGCTG
CTGGGCGTCA GCGGCGACCG CGCCGGCATG AATCGGAGCA TCCGTGAAAG CGCCTGGTAC
CAAGACTTGC GGACACGCTT TGGCGGCGAG GCCTGGTTCG GCACGGATGC CCAGTGGCTT
CCGGATGCGG CATTTCCGCT CGGGGCTTAC CCGACAACGC CGGTGGGCCG CATTGTCTCG
GACGGCATGG ACCACAAGGG GATGCATCCC TTCCCGACGC CGACGGCGAT CGTGCAGCCG
GGATCAGCAG GATTCGGCAC CCAGGCCGCG ATTGCCAACG CGCTCAACCA GCACCGGGAC
GAACTCGACG GGGTACTCTG GAATAGGCCG GCCGAGCAGC TCTGGTCAAG CCAGATCCGC
CAAGCCTGCA ACATGTGCGG CTACTGCGGA GAATACCTGT GCTGGGGCCG GACCAGTCCC
AAGTGGGGCA CTGCGGACAC CACGTTGCGG GAGTTGGGGC AGCGCGACAA CGCTGAGATC
CGCTGCAACG CTAAAACACT GGAAGTGCTA TACGATGCCG CTTCGCGCCG CGCCACGGGC
GTCGCGTATC TCGACCTGAC CGATCCGGAT CACCCCCGGC GCGTGGAACA GTTCGCCGAG
ACGGTCATCA TTTCGTGCGG TGCGGTGCAG ACTTCGCGCC TGCTGCTGCT GTCCGGGCCT
CCGGAGGGGC TTGGCAACTC GAGCGGTCAG CTCGGCCGCA ATGCGATGTT CCACCTCTTT
GGCCTCGGCA TGCGCACGGT GCTCGGGGAG GCGTTCCAGG GGCGATTGCA CGGGGAGCTT
GGCCCAACCG GCAACACCTC GACCTTCGAC ACGTATTTCG TGCGCGACGG CGACGGCCGC
TGGATCAAGG GCGGGCACCT GACCAGCGCC GCGAAGAAGA ACCCGCTCGA GGACGCCGTC
AACGCGGTCA ACGGGTCGAG CAAGGCCGGC GCGTTCCTCG ACCAATTGCT TGTCAACAAC
CGCACGTTCG AAATCCGCCT CACCGGCGAC GACCTGCCTT GCCCCGAAAA CCGTGTGTCG
CTCGATCCAA CCCATGTCGA CGAATACGGC GTTCCGGTTG CGCGGATCTC GCGGCGCTCC
ATTAGCGATG CGGCCGGCAA CAAGTTCGTC GGCCCGAACG AGCAACGCCT GGACGCAGCA
GCCCAAGGCG CAATGAAGGC GGTGTTCGAG CTCTACGCAG CCAGGCGAGG TGCGCTCGCT
GCAGCGCCCA AGCCGACGCA GGCCATTCTC TCCTTGGTGG GCGACCACCA GATGGGGACC
TGCCGGATGG GTGAGGATCC GGCGACGTCG GTCGTCAACC GCTACGGCCG CTTGCACGAT
GTCGAGAACG TCTTCGTGGT GGACTCCAGC TTCATGCCCA CGGGCCTGGG ATTGAATCCG
ATGGTCACCG TGGTGGCCAA TGCCTTGCGG GTCGGCACGC ACATCGTGAC CCGGCTCCAG
CAAGGTTCGA TGCCGGGGCG CTAG
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| Protein sequence | MKSKPDFLIV GSGGGGGTIA WVLASAGYDV LILEQGRNLA QQLRNPVLPF DPAVHDEELF
RLRKPDPKRR LRGDYNTFRD LGTRDPARAF DGGWTGSVLG GGSVLWGTWS FRPLPIDFRL
KTYYERTGEL GQLQKEGYNV ADWPLAYQEM MPYFHVAETL LGVSGDRAGM NRSIRESAWY
QDLRTRFGGE AWFGTDAQWL PDAAFPLGAY PTTPVGRIVS DGMDHKGMHP FPTPTAIVQP
GSAGFGTQAA IANALNQHRD ELDGVLWNRP AEQLWSSQIR QACNMCGYCG EYLCWGRTSP
KWGTADTTLR ELGQRDNAEI RCNAKTLEVL YDAASRRATG VAYLDLTDPD HPRRVEQFAE
TVIISCGAVQ TSRLLLLSGP PEGLGNSSGQ LGRNAMFHLF GLGMRTVLGE AFQGRLHGEL
GPTGNTSTFD TYFVRDGDGR WIKGGHLTSA AKKNPLEDAV NAVNGSSKAG AFLDQLLVNN
RTFEIRLTGD DLPCPENRVS LDPTHVDEYG VPVARISRRS ISDAAGNKFV GPNEQRLDAA
AQGAMKAVFE LYAARRGALA AAPKPTQAIL SLVGDHQMGT CRMGEDPATS VVNRYGRLHD
VENVFVVDSS FMPTGLGLNP MVTVVANALR VGTHIVTRLQ QGSMPGR
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