Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS01670 |
Symbol | RSp0899 |
ID | 1223206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1135071 |
End bp | 1135925 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637240759 |
Product | hydratase protein |
Protein accession | NP_522460 |
Protein GI | 17549120 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.339156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACTG TGCCAATCCT GGCGCTGACG ATTCTTGGCG CGGCTGCGCA GCTGGCGCAC GCGGCATGTC CGAGCGATGC CGCTGTTGCC GCGTATTTCG AGGACTACAA GGCGCCCCGC GAGAGCAAGG GGCTGGGTGA CGACCTGACC CTCGAAGAGG CCCGCTGCTC GCGCGACAAG CTGGCCCGGC TGCTGCCTTT GGCCGTAGGC CGCCCGGTCG GCTACAAGGC CGCCTTCACC AATCCCGCGA TCTGGGAGCG CTTCAAGGTG ACGGGGCCCG AATGGGGATA CATGTTCGGG AAGTACATGT TCAACTCGGG CGCGACGGTA TCGCCGAAGA TCGGCGCGAA GCTGCTCTAT GAGCCGGACA TGGTCGCGGT CGTCAAGGAT GCCGGATTGG CGACCGCCGA ATCGCCCCTC GAGGCGCTCC AGCACATCTC GTACTTCGCG CCCTTCATTG AGCTGCCGGA TGCCATGCGC TCGACCGGTG CGGTGGGGCC GGCGCTGGTC GCGACCAATA TCACCTTCCG CGGCGGCGTA CTTGGCCCGC GCATCGCCGT GCAGCCCAGG CAAGCGTTCC TGGATTCGCT GGCCAGCATG ACCGTCGTGA CGACCGAAGA CCAGACCGGC AAGGAGCTCG CCCGAGCCAA GGGCGACGCG CTGCTGGGCA ATCCCGCTGC CGCCGCGCTT TGGCTCGCCA AGGCACTTCG GGCATCTGGC GTGACCCTGA AGCGAGGGGA TTTGCTGAGC CTGGGCAGTT TCAATGCGCC GGTGCCGCCG CAGCCGAACA CGACCATCAC CGTCAAGTTC CTGGGACTGC CCAACGATTC ATCGGTGACG GCCCACTTCG AGTAG
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Protein sequence | MKTVPILALT ILGAAAQLAH AACPSDAAVA AYFEDYKAPR ESKGLGDDLT LEEARCSRDK LARLLPLAVG RPVGYKAAFT NPAIWERFKV TGPEWGYMFG KYMFNSGATV SPKIGAKLLY EPDMVAVVKD AGLATAESPL EALQHISYFA PFIELPDAMR STGAVGPALV ATNITFRGGV LGPRIAVQPR QAFLDSLASM TVVTTEDQTG KELARAKGDA LLGNPAAAAL WLAKALRASG VTLKRGDLLS LGSFNAPVPP QPNTTITVKF LGLPNDSSVT AHFE
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