| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00945 |
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| Symbol | RSp0458 |
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| ID | 1222765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 572493 |
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| End bp | 574256 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637240318 |
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| Product | rhs-related protein |
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| Protein accession | NP_522019 |
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| Protein GI | 17548679 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.68449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTCCCG GAACTGGTAC GACCGGTGTT TCCGCGCAGG ACGAAGGCAG TAGCGCGGAA
CTACCTGTCA CACTCGCTTA CCAGTCCTAC AGCATCTATA GAGCAAGCGA CGGGGCGGCT
CAATGGACAT CCAACTGGCA GCGCAGCCTG GATACAAGTG CGGTGACTTA CTCGAATGCA
CAGGTCACCG TCTTGCGAGA TGATGGCTCG GTGTATGGAT TTCGCCAGAG TGGTGCGGCA
TGGACGGCTT CCGGCACCCA AGACATGCTG AGCTCCATCA CTGATGCCAA CGGCAAGACG
ACCGGCTGGC AGTACACGGT GGTCAATACG GGGGCAGTGG AGACCTACGA TGCTAGCGGC
AAGCTGCAAT CGGTCCGCGA TCGCAATGGC CGCACCACGA CGCTCTCCTA CAACGCCGCC
AATCAACTGA CGACAGTCAC TGCCCCGAGC GGGCGCAGCC TGAGCTTTGC CTACGACGGC
CAGAACCGTG TGGCGAGCGT GACCGCGCCC GATGGCGCTA TCACTGGCTA CGGCTACAAC
GGCGCCGGTA TGCTGTCGAG CGTCACCCGG CCAGGTGGCG CAGTGCGTCA GTATGTCTAT
GAGGACAGCC GTTTCCCGAC CGCCCTGACC GGCATCATCG ACGAGAACGG CAGCCGCTAC
GCCACCTACG CCTACGACGA CCAGGGCCGT GCCATCAGCA GCACACTGGC AGGTGGTGCG
AACCAGTACC AGTTTCAGTA CGGCGACAAC TACCAGACCA CCGTCACCGA CCCGACCGGC
AAGACCAGCG TCTACACATT CCTCAAGCAG AACGGTGTGC TGCTGCCGAC CTCGATCAGC
GCGCCCTGCG GCCTGTGCGG CAGCACCCGC CAGAGCAGCA GCTATGACGC CAACAACAAC
CTGATCCAGG AAACCGACTA CAACGGCACC GTCACCACTC ACACCTACGA CGGCCAGAAG
CGTGAGATCC GGCGCGTGGA CGGTGCTGGT ACGACCAGCG CCCGCACCAC CACCACCGTG
TGGCATCCGC AGTTCTGGAA CCTGCCGACG CAGATCGCCT TGCCGACCAA GCTGCAAAGC
TACAGCTACG ACAGCAACGG CAACCTGACC AGCTACAGCG AAACGCCCAC GGCCGATACC
GACGGCAGCC AGGGCGTCAG CGCTGCCGCG GCTGGCGCAA CCCGAACCAC CAGCTGGACC
TACACCGCCG ATGGCCAAGT GGCCACCAGC AGTGGCCCGC GTACCGATCT GAGCACGGCC
ACCACCTACG TCTATCGCAC AGCGGACGAC ACGGCTACGC CGCCGCTGTA CCGCAAGGGC
GACCTGTACC AGATCGTCGA TCCGCTGGGC CACACCACCA CGATCAACCA GTACGACGCC
AGCGGCCGTC CGCTGCAGAT GACGGACGCC AATGGCACGG CCACCGCGTT CACCTACTCG
AACCGTGGCT GGCTGACCAG CCAGACCATC GCCCCGGCGA GCGGGACGGG CCAGACCACC
AACTACAGCT ATGACGCGGT GGGCCAGTTG ACCAAGGTGA CGCTGCCGGA CGGCAGCAAT
GTCAGCTTCA GCTATGACGG TGCGCACCGC CTAACCGGCG CAGCCGATAG CCAGGGCAAC
AGCATCAGCT ACACGCTGGA TGCGATGGGC AACCGCACCC AGGAACAGGC CAAGGACCCG
AGCGGCAACC TCGCCCGCCA GGTCACCCGC GTCTTCGATT CGATGAACCG GCCGCTCAAG
GTCACGGTCG GGATTGCACA GTAA
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| Protein sequence | MIPGTGTTGV SAQDEGSSAE LPVTLAYQSY SIYRASDGAA QWTSNWQRSL DTSAVTYSNA
QVTVLRDDGS VYGFRQSGAA WTASGTQDML SSITDANGKT TGWQYTVVNT GAVETYDASG
KLQSVRDRNG RTTTLSYNAA NQLTTVTAPS GRSLSFAYDG QNRVASVTAP DGAITGYGYN
GAGMLSSVTR PGGAVRQYVY EDSRFPTALT GIIDENGSRY ATYAYDDQGR AISSTLAGGA
NQYQFQYGDN YQTTVTDPTG KTSVYTFLKQ NGVLLPTSIS APCGLCGSTR QSSSYDANNN
LIQETDYNGT VTTHTYDGQK REIRRVDGAG TTSARTTTTV WHPQFWNLPT QIALPTKLQS
YSYDSNGNLT SYSETPTADT DGSQGVSAAA AGATRTTSWT YTADGQVATS SGPRTDLSTA
TTYVYRTADD TATPPLYRKG DLYQIVDPLG HTTTINQYDA SGRPLQMTDA NGTATAFTYS
NRGWLTSQTI APASGTGQTT NYSYDAVGQL TKVTLPDGSN VSFSYDGAHR LTGAADSQGN
SISYTLDAMG NRTQEQAKDP SGNLARQVTR VFDSMNRPLK VTVGIAQ
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