| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00878 |
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| Symbol | RSp0421 |
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| ID | 1222728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 534437 |
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| End bp | 536272 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637240281 |
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| Product | siderophore biosynthesis protein |
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| Protein accession | NP_521982 |
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| Protein GI | 17548642 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4264] Siderophore synthetase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0338478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTTT CTTCCACGCA GCGCGGCTCG CCCGTGCGAG ACGCCGCCCT TCACGTGCCG
CAGGCATCCC GCGCGATGCA CCGCGTCGAT GCGCCGGCCG GCCGCGACCG ATTGCCGGCG
CTCGATCGCC GGCTGCTCGA ACAGTACTTC AACACGTATT GCCGCGAAAC GGGCCGCTTC
GATCCGCGCG TGACGGACGA TGCCGGCCTG GCCGACGACC TGCGCCGCGC CGCGCAGGCC
TGGCGCGACG AAGGCCATGC CGTTGCCTGC GTGGCGTTTG CGCACGATGG CAGCCGGCTG
TATGTGGCGA TCGAGCGGTT TTCGCCGATG GGGTTCCACC GGCTCGCGCC TTATGCGGCA
CTGCAGCTGG CCGACGGCAG CGTGACGGCC TGCGACAGCC CCGAGGCGCT GACCGCGCGC
ATCGCCGGGG CGCTCGCGTT CCGCCAGCCG CCCGCCGATG CGGCATGGCC GCAGCGCTTC
GCCGCGCTGA TGCGCAACAG CATCGAGCGC GTGCGCTACT ACCACGACCA CGCGCCGCGC
CGCGAGCAGC CCGCCACGCC GTTCGTCGGC GCGGAGCAGG CGCTGCTGTT CGGCCATGTC
TTCCATGTCA CGTCCAAGGC GTCGGAGGGC TTCAGCGAGG ACGACATGCA GGCCTACGCT
CCGGAGCTGG GCGCGTCGTT CCGCCTGCAC TACTTCGCGG TGTCGAGCCG CCTGTTCGAT
GCGCGCACGA TCGACGCATC GCAGCCGCCG ATCGATCCCG AGGCGATGCA TGCCGCCACG
GCGCTGCTCG GCGACAGCGA ATACCGGCTG CTGCCGTGTC ACCCGTGGCA AGCCGGCCAT
CTGCTGCGGC AGGCCGTGAT CCAGTCGCTG ATCGCGCGGC GCGAGCTGAT CTCGCTCGGC
GCGCTGGGTG AGGTCGTGTG GCCGACGTCG TCGGTGCGCA CGGTGTGGCT GCCCCGGCAG
CGGCAATTCC TGAAGCTGTC GCTCGACGTG CGGATCACGA ACTTCGTGCG CAACAACCCG
CCCGAGCAGG TTGCCCGCGC GCTCGACGCG AGCCGGTACC TCGCGGCGTT GCCGGCCGCG
TGCCGGTCGT CGGAGGCCTT CGAGATCCTG TTCGATGCCG GCAGCGCGTC GCTGGCGGTG
GGCGATGAAG CGCTGCGCGC CAGCACCACG GTCGTCTATC GCCAGGCGAT GCGCGACGCG
GTGGGCGACG ATGCGCGCGT GCTGGCCACC GTGCTCGAAG CGCCGGCGAG CGGCGCGGCG
CCGCTGCAAG CCCTGCTGCA GGAAGCCCTG GGCCAGGCGC CGTCGTTCGA GCGGCTCGCC
GCCTGGTGGA CGCGCTACCT CGATGTCACG CTGATGCCGC TGCTGCGTCT GTTCGCGTGC
CACGGCGTCA GTCTCGAGGC GCATCTGCAG AACGCGATGG TGGCCTTCCG GGCCGGCTGG
CCGGTGCGCG GCTACGTGCG CGACATGGAA GGCGCCAGCA TCAGCCGCAC GCGCTGCGCA
CGGCCTGAAC TGCTCGCGCA ACAGAGCCCC GCGCTCTACG ACGACGAGGC CGCATGGAAG
CGCTTCCGCT ACTACGTGCT GGTCAACCAT ATCGGCCATG TCATCGCGAG CATTGCCCGC
ACCGGCGCTT GCGACGAAGC CGCGCTCTGG CGCGTGACCG CGCAGGTCTG GGCGCGCGAT
GCCGAGCCCG CCGTGGCCGC GCTGCTGGAC GACGTGCGGC GCCGGCCGAC ACTGCCCGCC
AAGGCGAACA TGCTGAGCTG CTTCGGCGGC CACGGCGAGG CGCCTGCCTG GGTCGAGATT
CCCAACCCGC TTGCCGACGA GGAGCACCGC GCATGA
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| Protein sequence | MTFSSTQRGS PVRDAALHVP QASRAMHRVD APAGRDRLPA LDRRLLEQYF NTYCRETGRF
DPRVTDDAGL ADDLRRAAQA WRDEGHAVAC VAFAHDGSRL YVAIERFSPM GFHRLAPYAA
LQLADGSVTA CDSPEALTAR IAGALAFRQP PADAAWPQRF AALMRNSIER VRYYHDHAPR
REQPATPFVG AEQALLFGHV FHVTSKASEG FSEDDMQAYA PELGASFRLH YFAVSSRLFD
ARTIDASQPP IDPEAMHAAT ALLGDSEYRL LPCHPWQAGH LLRQAVIQSL IARRELISLG
ALGEVVWPTS SVRTVWLPRQ RQFLKLSLDV RITNFVRNNP PEQVARALDA SRYLAALPAA
CRSSEAFEIL FDAGSASLAV GDEALRASTT VVYRQAMRDA VGDDARVLAT VLEAPASGAA
PLQALLQEAL GQAPSFERLA AWWTRYLDVT LMPLLRLFAC HGVSLEAHLQ NAMVAFRAGW
PVRGYVRDME GASISRTRCA RPELLAQQSP ALYDDEAAWK RFRYYVLVNH IGHVIASIAR
TGACDEAALW RVTAQVWARD AEPAVAALLD DVRRRPTLPA KANMLSCFGG HGEAPAWVEI
PNPLADEEHR A
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