Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS00870 |
Symbol | RSp0413 |
ID | 1222720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 522869 |
End bp | 523309 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637240273 |
Product | hypothetical protein |
Protein accession | NP_521974 |
Protein GI | 17548634 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.123974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.579728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCTG ACCTTGCATA CTGCGTGGCG CTGCGGCCCA CCGCGTTTTT CATGCCGTCC GAAGAAGTGG ACGCCGATCA TGTCCGCCGC CTGGCCGACG CCATCCGCGC CACCGGCCTG TGGACCACGC CGATCCCGAT CGAGCGCGAC ACCGGCATCG TGATGGACGG CAACCACCGC ATCCGCGCGG CCGCGCTGCT GGGGCTGCAC CACCTGCCGT GCGTGCTGCT GGATTACGCC GACCCGCGCG TGTCGGTCAC GCACTGGGGG TCGGGCGCGC CGTTCAGCGT TGCCAGCATC CGGCAGCGTA TCGTGGCGCA GCGGCGCCTG TTCCCGTACA AAACGACACG CCACCGCTTC GCGCCCGCGC TGCCCGGCAC GGAGATCCCG CTGACAGTGC TGGGCGCCAC GCACGGCGCG CGGGTCGCCG CCCTGGCGTA G
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Protein sequence | MQADLAYCVA LRPTAFFMPS EEVDADHVRR LADAIRATGL WTTPIPIERD TGIVMDGNHR IRAAALLGLH HLPCVLLDYA DPRVSVTHWG SGAPFSVASI RQRIVAQRRL FPYKTTRHRF APALPGTEIP LTVLGATHGA RVAALA
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