| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00407 |
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| Symbol | RSp0528 |
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| ID | 1222835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 658157 |
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| End bp | 659512 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637240388 |
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| Product | putative outer membrane cation efflux system protein |
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| Protein accession | NP_522089 |
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| Protein GI | 17548749 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00236087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTCTT TTCAGGAGGC GGCCTCGCCG TGTTCCGTGG CGCGCGTGCG CGTGCCGAAA
CGTGTCTTGC TGGCGGCCAT GCTCGCCTGG ATGGCGATGC CGGCGACGGC CGCGCCGCGC
GCCGCGGATC CCGCTTCGCA GGCGGCACGG GCGGTCGCGC CCCGTGACGA AGCGGCACCG
CTGCCGCGCT ATTCGCTGCC GCAGTTGCTT GAGTTGGCGC GGGCCGGCCA CCCGGCCCTG
GCCGCATCCC GCGCGCAGGT GCAGGCGGCC CAGGCCGGCA TGGCCACCGC CCGGGCATGG
CCGAACCCCG AGGTCGAAGC GATGACCGGC CGCCAGCGGG CACGCATGCC AGGTGCGGCG
GAAGGCCGCA CCAACAGCAT GTCGATCACG CAGAAGCTCG ACTTGCCGTG GCAGCGCACG
GCACGCATGC AGGCGGCCGA TGCCGCGTTC GAGGGCTCCC AGGCACAGGC GCGTTCGTCC
GCCCGCGATC TGGAGGCGCA GCTGAAGCTG CGCTTCTACG ACGTGCTGCG CCGCGAAGCC
GAGCAGCGCA GCGCCCGCGA GGACGTGACG CTGGTCGAGC AGATCCGCCG CCGCGTTGCC
GTGCGCGTGG AGACGGGCGA GGCGCCGCGC TACGAGCTGA TCCGCGGCGA TGCCGAACTG
CTCAATGCGC AGCGGACCGA CCAGGCTGCG GCGCTGCGCG TGCAGCAGGC CCTGGCCGAG
CTGCGCCGCG CCGTGGGCGC GGAGCTGCCC GCCGCATTCG ATGTGGACGC CGGCCCCGAT
GCGGAATCCG CCGCCGTCCA CAACCTGCCG CCGCTGGCCG ATCTGGTCGG CAGCGTGCTG
GCCACGCATC CGGACCTGGA GGCCGACCGC GCCGCCGTGC GCGAAGCCGA GGCGCGCCTG
GCGCACGAGC GCAGCCAGCG CTGGCCGTCG CTGGCGCTGC GCGGCTCGGT GGACCGCCAG
CCCGATCTGC AGGACAGCCG CGTCGGCCTG GTGGTGTCGA TCCCGCTGTT CGACCGGCGC
GAAGGTCCGG TGGGCGAAGC CGTGGCCGCG CTGGAGCGTG CCCGTGCCAC GCTGCGCGAC
CGCGAGCTGC AGATGCGGCA GGCGGTGGAG TCGGCGTACC GCCAGTACGA GATTGCGCAG
TCGCAGGTCG GCGCGCTGGA GTCCGGCGTG GTGAAGCAGG CCGAATCGAC CCTGCGGGTG
GCCGAGGCCG CGTACCGCCA CGGCGAGCGC GGCATTCTCG ACTACCTCGA CGCCCAGCGC
GTGTTCCGCC AGGCCCGCAA CGACCTGATC GCCGCCCGTG CCGACCTGCG CGCGGCCGCC
GTCGAACTCG ACCGCCTGCG CGCGGAGGCC CCGTGA
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| Protein sequence | MLSFQEAASP CSVARVRVPK RVLLAAMLAW MAMPATAAPR AADPASQAAR AVAPRDEAAP
LPRYSLPQLL ELARAGHPAL AASRAQVQAA QAGMATARAW PNPEVEAMTG RQRARMPGAA
EGRTNSMSIT QKLDLPWQRT ARMQAADAAF EGSQAQARSS ARDLEAQLKL RFYDVLRREA
EQRSAREDVT LVEQIRRRVA VRVETGEAPR YELIRGDAEL LNAQRTDQAA ALRVQQALAE
LRRAVGAELP AAFDVDAGPD AESAAVHNLP PLADLVGSVL ATHPDLEADR AAVREAEARL
AHERSQRWPS LALRGSVDRQ PDLQDSRVGL VVSIPLFDRR EGPVGEAVAA LERARATLRD
RELQMRQAVE SAYRQYEIAQ SQVGALESGV VKQAESTLRV AEAAYRHGER GILDYLDAQR
VFRQARNDLI AARADLRAAA VELDRLRAEA P
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