| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00403 |
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| Symbol | RSp0524 |
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| ID | 1222831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 654615 |
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| End bp | 656093 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637240384 |
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| Product | transmembrane sensor histidine kinase transcription regulator protein |
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| Protein accession | NP_522085 |
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| Protein GI | 17548745 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00328679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTTTT CGGTGCCCGC GATCCTGCGG GTCCGCTCGC TGTCGTTTCG CCTCTATGTC
CTGATCCTGC TGGCGCTGGT GCTGATGCTG CTGGTGCAGC TCGCCATCGC CTATCTCGAG
ATCTCCCGCT CCAACAGCCG CCAGGTGGTC AGCGACCTGC GCATGTCGGC CCAGGCCTAT
GCGGACCTGA CCACGCTGAA CATGGATGAC GAACCGCGCC GCGAAGAATT CCTGCAGCGG
CTGACCGACA TCCGGCTGGG CCTTTCGCAG CCCGATCTGC TGCCCGGCGA ATTCCGCTAC
GTGCTGTGCG ATCACGCCGG CAAGGTCGTC GCGGCGCTGC CTGGTGCACC CACCATGCCG
TGCGGTACGG CACACGGCAA GGTGGTCGAG ATCATGCTCG AAGGCGTGCC TTGGCGCGCC
TACACCGTCG ACAGCATCGA CGGCAAGCTG ACCGCCACCG TCGCGCAGCC GATGTCCGCC
TACGAGCGCG CCATCCGCGA CCTGTACCGT GAAGTTGCCC TGACCATCGC GTTCCTGGCG
GCCGTGCTGA TGGTGATGGT GGGCTGGGCC GCGCACCAGG GCCTCAAGCC GCTGCGCGCG
CTGACCCGTC AGGTCGAAGC GCGTGACACG GCCGACCTGG AGCCCGTGCA GAGCGTCGCG
CATGCCGAGC TCAAGCCGCT GGTGCAGGCG CTCAACGGCC TGTTCGAGCG CGTGCAGCGC
AGCATCGACG CCGACCGCCG CTTCTTCGCC GACGCCGCCC ACGAGTTGCG CACGCCGCTG
GCGGCGATCC AGGCGCAGGC TTACGTGGTG TCGCATTCCG ATAGCGAGGA CGACCGCTCG
ACCGCGCTGC GCGAGTTCGA TCGCGGCATC TCGCGCGCCA CGCAATCGCT GTCCAAGCTG
CTGGCGCTGG CGCGGTTGGA TGCGCGCAGG GTCGAGGCGC ATCTGGCGCA GGGCACCTTG
TCCGACCTGG CGGGCTGTGC CCGCAGCGGC GTGATCCAGC AGGCGTCCCG CGCGGAGCGG
CGCAATGTCA TCCTGTCGTA CGACGGGGCC AGCCAGGCGT GGGTGCCGGT GTCGCACGAG
GATGCCGCCA CGCTGGTGGA GAACCTACTC GACAACGCCG TGCGCGAGAC GCCCGACGGC
GGCGAAGTCC AGGTCGGCGT GCGGCGGCTC GAGGTCGGCG GCAGGCCGAT GATCGAACTG
CGCATCGAAG ACACCGGCCC GGGCATCCCG CCCGAAGAGC GCGAGCGCGT GTTCGAGCGC
TTCTACCGGC CGCGCGGCAG CCAGTCGCAG GGCAGCGGGC TCGGGCTGGC CATCGTGCGG
CGCATCGTGG AGCTGGGCAA AGGCGCGGTC GCCATCGAAG ACGGGCGCGG CGGCAAGGGC
TGCGCGGTCG TGATCCGGCT GCCCGCCCTG ACCAGCGTCC CGGAGCCGCT CGACCCGCAG
GACGAGCCGC CGGGGACGGC GGATGCGCCG ACCCGCTAG
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| Protein sequence | MKFSVPAILR VRSLSFRLYV LILLALVLML LVQLAIAYLE ISRSNSRQVV SDLRMSAQAY
ADLTTLNMDD EPRREEFLQR LTDIRLGLSQ PDLLPGEFRY VLCDHAGKVV AALPGAPTMP
CGTAHGKVVE IMLEGVPWRA YTVDSIDGKL TATVAQPMSA YERAIRDLYR EVALTIAFLA
AVLMVMVGWA AHQGLKPLRA LTRQVEARDT ADLEPVQSVA HAELKPLVQA LNGLFERVQR
SIDADRRFFA DAAHELRTPL AAIQAQAYVV SHSDSEDDRS TALREFDRGI SRATQSLSKL
LALARLDARR VEAHLAQGTL SDLAGCARSG VIQQASRAER RNVILSYDGA SQAWVPVSHE
DAATLVENLL DNAVRETPDG GEVQVGVRRL EVGGRPMIEL RIEDTGPGIP PEERERVFER
FYRPRGSQSQ GSGLGLAIVR RIVELGKGAV AIEDGRGGKG CAVVIRLPAL TSVPEPLDPQ
DEPPGTADAP TR
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