Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3427 |
Symbol | |
ID | 1222291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3699237 |
End bp | 3700055 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637239844 |
Product | hypothetical protein |
Protein accession | NP_521546 |
Protein GI | 17548144 |
COG category | [S] Function unknown |
COG ID | [COG5435] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAAT ACCAGATGCA CGACGCGTTC ATCGATCTGC CCGCGCACTT CAAAGACAAG ACGATGCACC TGTTTACTGT CGGCGAGGCT GGCACGAGTG CATTCACGTT TGTCGTTTCG CGCGCGCCGA TGGAGCCCGG AGACACGGTC GATACATTCG CGACACGGTT GGTTTCCGAA ATGCGCAAGA CCTTGCCGCG CTTTGAACTG AAGCACCTCG GCGAGAGCGC GGTTGATGGA GAAGCGGCGA GAGAAATCAA CTATCAGTGG GTATCGGAAG GTACTCCGCT GCACCAGCGC CAGATGGTTG TCATGTCGCC AGTGGCGGGG CGGGATCGTA CCGCGATCAG CTTCATCGGG ACGTGTCCCA AGGGATTTAC GCCGGAGGCG GAGAAGGCGT ACTCGGAACT CATCGGAAGC GTCGTCCTCA AGCGGTCCGA CGTGTCGGCG TTCGTAGCTG TGCCGCTCGA CTCCAGTACG GTGGGGAATG TGTTCGTGCT GCAAGAGTCC AGTCGAACGC TGTATGCGTT GCCAAGCATC ACGGACCTGT TCCGCCACGA TGTAATGGAA ATGTTCAGCG GCGTGACGTT CTACGATGCG CAGGGCGTGC AGCTGGCACT GGGGCCCGCC CCCGAGGGTC AGCAGGCATG GCGCAGGCCG GACGGACGGC ACTTCACGCT CTGGACAACC GACCCGCAAG CGAGCGAGCC GCTGCAAGCG CGGCTTGGCG ATGTTGCGGC GGTGAAGGGC ATGGCGAGTC TGCCAACCAT CGAGGCCGTC CAGGCGGCAC TGGTCGGCGT AGTGGACAAC CCGCGCTGA
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Protein sequence | MPEYQMHDAF IDLPAHFKDK TMHLFTVGEA GTSAFTFVVS RAPMEPGDTV DTFATRLVSE MRKTLPRFEL KHLGESAVDG EAAREINYQW VSEGTPLHQR QMVVMSPVAG RDRTAISFIG TCPKGFTPEA EKAYSELIGS VVLKRSDVSA FVAVPLDSST VGNVFVLQES SRTLYALPSI TDLFRHDVME MFSGVTFYDA QGVQLALGPA PEGQQAWRRP DGRHFTLWTT DPQASEPLQA RLGDVAAVKG MASLPTIEAV QAALVGVVDN PR
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