Gene RSc3427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3427 
Symbol 
ID1222291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3699237 
End bp3700055 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content62% 
IMG OID637239844 
Producthypothetical protein 
Protein accessionNP_521546 
Protein GI17548144 
COG category[S] Function unknown 
COG ID[COG5435] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAT ACCAGATGCA CGACGCGTTC ATCGATCTGC CCGCGCACTT CAAAGACAAG 
ACGATGCACC TGTTTACTGT CGGCGAGGCT GGCACGAGTG CATTCACGTT TGTCGTTTCG
CGCGCGCCGA TGGAGCCCGG AGACACGGTC GATACATTCG CGACACGGTT GGTTTCCGAA
ATGCGCAAGA CCTTGCCGCG CTTTGAACTG AAGCACCTCG GCGAGAGCGC GGTTGATGGA
GAAGCGGCGA GAGAAATCAA CTATCAGTGG GTATCGGAAG GTACTCCGCT GCACCAGCGC
CAGATGGTTG TCATGTCGCC AGTGGCGGGG CGGGATCGTA CCGCGATCAG CTTCATCGGG
ACGTGTCCCA AGGGATTTAC GCCGGAGGCG GAGAAGGCGT ACTCGGAACT CATCGGAAGC
GTCGTCCTCA AGCGGTCCGA CGTGTCGGCG TTCGTAGCTG TGCCGCTCGA CTCCAGTACG
GTGGGGAATG TGTTCGTGCT GCAAGAGTCC AGTCGAACGC TGTATGCGTT GCCAAGCATC
ACGGACCTGT TCCGCCACGA TGTAATGGAA ATGTTCAGCG GCGTGACGTT CTACGATGCG
CAGGGCGTGC AGCTGGCACT GGGGCCCGCC CCCGAGGGTC AGCAGGCATG GCGCAGGCCG
GACGGACGGC ACTTCACGCT CTGGACAACC GACCCGCAAG CGAGCGAGCC GCTGCAAGCG
CGGCTTGGCG ATGTTGCGGC GGTGAAGGGC ATGGCGAGTC TGCCAACCAT CGAGGCCGTC
CAGGCGGCAC TGGTCGGCGT AGTGGACAAC CCGCGCTGA
 
Protein sequence
MPEYQMHDAF IDLPAHFKDK TMHLFTVGEA GTSAFTFVVS RAPMEPGDTV DTFATRLVSE 
MRKTLPRFEL KHLGESAVDG EAAREINYQW VSEGTPLHQR QMVVMSPVAG RDRTAISFIG
TCPKGFTPEA EKAYSELIGS VVLKRSDVSA FVAVPLDSST VGNVFVLQES SRTLYALPSI
TDLFRHDVME MFSGVTFYDA QGVQLALGPA PEGQQAWRRP DGRHFTLWTT DPQASEPLQA
RLGDVAAVKG MASLPTIEAV QAALVGVVDN PR