Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3416 |
Symbol | |
ID | 1222280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3692511 |
End bp | 3693356 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637239833 |
Product | hypothetical protein |
Protein accession | NP_521535 |
Protein GI | 17548133 |
COG category | [V] Defense mechanisms |
COG ID | [COG1715] Restriction endonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAAGC GCAACGACGA CACCGTCCAG CAAGGCCTGT TCGAACCCGC ACACATGCTG CCCTGGTGGC TGGGGCCCGC ATTGGCCGTC ATCGCGTACG GCATCCTCCA CCGCTACGCC AGCATTCCCG AACCCGTCCA AGCCATTCCC GACCAAGCCG GTGACATGGA CATCGGCCAG CTGTTCAAGA CCCTGGCCAC GGTCGGCCAA TACCTCGTAC CGCTCGCCCT GCTGGCCGGC GCCGCCGCTG CTCACTTCGC CCAGCGCAGG CGCGAGCAGC TAGCGCACAG CGTGGCCCAA AGCAGACAAG GTGACGCCCT GCGCCGGATG AGCTGGCACG AACTCGAACG GCTTGTCGGC CAGGTCTTCC GCATGCACTG CTACACCGTG ACGGAAACCG GCGACGGCGC AGATGGCGGG GCCGACCTGC AACTGCACAA GGGCGGCGAG CTGTATCTCG TGCAGTGCAA GCAGTGGCAG GCGTACAAGG TGTCCATCGA CGCGGTGCGC GAGCTGCATG GCCTGATGGT CGCCCAGGGC GCGGCCGGCG GCTTCGTGGT GACCTCCGGC GTGTTCACCG CGGACGCCAG GGCCTTCGCC AAGGGCAAGC ACATCGCCCT CGTCGACGGC GTGACGCTGA CTACGCTGAT CAAGCAAGCC CAAGCGTTAG CGCTTGCCAG GAAGACCATG CCCGGCGCGC GACCGAGCTC GTCCACCGAA CGCCCCCATT GCCCGCGTTG CGGCAGCGTC ATGGTGCGCC GGACTGCCAA GCAAGGTGCC AAGATGGGTA GCCACTTTTG GGGGTGTGTT ACGTACCCGG AGTGTCGGGG GACGCGTGGG CTTTAA
|
Protein sequence | MAKRNDDTVQ QGLFEPAHML PWWLGPALAV IAYGILHRYA SIPEPVQAIP DQAGDMDIGQ LFKTLATVGQ YLVPLALLAG AAAAHFAQRR REQLAHSVAQ SRQGDALRRM SWHELERLVG QVFRMHCYTV TETGDGADGG ADLQLHKGGE LYLVQCKQWQ AYKVSIDAVR ELHGLMVAQG AAGGFVVTSG VFTADARAFA KGKHIALVDG VTLTTLIKQA QALALARKTM PGARPSSSTE RPHCPRCGSV MVRRTAKQGA KMGSHFWGCV TYPECRGTRG L
|
| |