| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3352 |
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| Symbol | |
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| ID | 1222216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3613046 |
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| End bp | 3614050 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637239769 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | NP_521471 |
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| Protein GI | 17548069 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.568086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAGA CCCTGGACGC GACTGCCACG GCGGCGCGCT TGCCGTATGT CGCCCTGGCC
GATGCCATCG CGCAGGTGCT GCGCGACGCG CGCGCGGGCC GTGCCCAGGC GCCGGCGCGG
CTGGTGATGC CGGTGCCCGG GCCGGGCAGC CTGCTGCTGA TGCCGGCGTC CAATGCCGAG
ATCGCCATCA CCAAGATGAT CACCGTGCAT CCGCACAACG CCGCGCATGG GCTGCCCGCC
ATCCATGGCG AGGTGGTGGT GATGGATGCG GCGACCGGCG TGCGCCGCTT GTTGCTCGAC
GGCCCGACCG TGACGGCGCA TCGCACAGCC GCGGTCTCGC TGCTGGCCGC GCGGCTGCTG
GCGCCGGAGC CCGCCGGCGA CCTGCTGCTG ATCGGGGCCG GGGCGCAGGC GCGCGCGCAT
CTGGAAGCGT TCCGCATGGG GCTCGGCACG CGGCGCGTCA CCATCGTCAC CCGGACCGAG
GCCAACGCCG AGGCGCTGGC CGCCCATGCA CGCAAGCTCG GCCTGGAGGC GACCGCGGTG
GCCGCGGGCG ATGCAGCGGG CATGGCCCAG GCGGCGCGCA TCGTGCTGCC TTACGCGCCG
CTGGTGATCA CGGCCACGCC CTCCACCCAG CCGGTCCTGC CGGACCTGGC GGAATCGGGC
ACGGCGGGCG TGGGCCAGGT CTGGCGCGCG CAGCACTTCA TTGCGGCGGT CGGCGCGTTT
CGTCCCGAGA TGGCCGAACT GCCGCCGCGG CTGTGCATGC AGGCTGCCGC GTCGGACCGG
CTCTTTGCCG ATACCCTGAC CGACCTCGAT GCCGAAGCGG GCGACCTGCT GCAGGCGGGC
GTGCCCTGGT CGTGTGTACG GCCGTTACAA CAGTGCATCG ATGCGGCGCC CGACATCGGC
GCACAGGCCG CGCCGGGGGT GCCGGTGGTG TTCAAAAGCG TGGGCAGTGC CTTGTGGGAC
TTGGCCGCAT GCGCCCTGGC GCTGTCGAAG GCGCCACCCG TTTGA
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| Protein sequence | MLQTLDATAT AARLPYVALA DAIAQVLRDA RAGRAQAPAR LVMPVPGPGS LLLMPASNAE
IAITKMITVH PHNAAHGLPA IHGEVVVMDA ATGVRRLLLD GPTVTAHRTA AVSLLAARLL
APEPAGDLLL IGAGAQARAH LEAFRMGLGT RRVTIVTRTE ANAEALAAHA RKLGLEATAV
AAGDAAGMAQ AARIVLPYAP LVITATPSTQ PVLPDLAESG TAGVGQVWRA QHFIAAVGAF
RPEMAELPPR LCMQAAASDR LFADTLTDLD AEAGDLLQAG VPWSCVRPLQ QCIDAAPDIG
AQAAPGVPVV FKSVGSALWD LAACALALSK APPV
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