Gene RSc3304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3304 
Symbol 
ID1222168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3567034 
End bp3567501 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content71% 
IMG OID637239721 
Productsignal peptide protein 
Protein accessionNP_521423 
Protein GI17548021 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0282721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGCA AGCGCTGTCT GGGATGGCTG CGGGCCGCGG GTGTCGTGGC CGCGTCGGCA 
ATGTGTCCGG GGGCATGGGC GCAGGCTTCG GCACCGGCGG CCGCGCCACC GCTCGCCCCG
CAGATCATCG ACATGGGCGC CATGACCGCC GCCGACATCG GCCCCATCGT GCCCGACATG
GGGACGCTGC GCACCAGGGG GCTGGTGGCG ACCGCCAGCG GGACCGTGGG CATCCAGGCC
GGCACCGTCG TCAAGCACAC GCATGCCTAT TCCGACGAGA TCCAGTACGT GATGGCCGGC
ACCGCCACCG TGTGGCTCGA CAACGGGCCG CGCGAGGTGC ACGCGGGCGA CCTGATCGTG
ATCCCGCGCG GCGTCGTGCA CGGGACGTTG GCGACCAGCG CGGACTTCAG GGCGATGGCG
ATCAAGCTGC CGCCGCAGCG CTCGGGGGAT ACCCAGAAAG TCCCCTGA
 
Protein sequence
MHRKRCLGWL RAAGVVAASA MCPGAWAQAS APAAAPPLAP QIIDMGAMTA ADIGPIVPDM 
GTLRTRGLVA TASGTVGIQA GTVVKHTHAY SDEIQYVMAG TATVWLDNGP REVHAGDLIV
IPRGVVHGTL ATSADFRAMA IKLPPQRSGD TQKVP