Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3304 |
Symbol | |
ID | 1222168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3567034 |
End bp | 3567501 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637239721 |
Product | signal peptide protein |
Protein accession | NP_521423 |
Protein GI | 17548021 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0282721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCGCA AGCGCTGTCT GGGATGGCTG CGGGCCGCGG GTGTCGTGGC CGCGTCGGCA ATGTGTCCGG GGGCATGGGC GCAGGCTTCG GCACCGGCGG CCGCGCCACC GCTCGCCCCG CAGATCATCG ACATGGGCGC CATGACCGCC GCCGACATCG GCCCCATCGT GCCCGACATG GGGACGCTGC GCACCAGGGG GCTGGTGGCG ACCGCCAGCG GGACCGTGGG CATCCAGGCC GGCACCGTCG TCAAGCACAC GCATGCCTAT TCCGACGAGA TCCAGTACGT GATGGCCGGC ACCGCCACCG TGTGGCTCGA CAACGGGCCG CGCGAGGTGC ACGCGGGCGA CCTGATCGTG ATCCCGCGCG GCGTCGTGCA CGGGACGTTG GCGACCAGCG CGGACTTCAG GGCGATGGCG ATCAAGCTGC CGCCGCAGCG CTCGGGGGAT ACCCAGAAAG TCCCCTGA
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Protein sequence | MHRKRCLGWL RAAGVVAASA MCPGAWAQAS APAAAPPLAP QIIDMGAMTA ADIGPIVPDM GTLRTRGLVA TASGTVGIQA GTVVKHTHAY SDEIQYVMAG TATVWLDNGP REVHAGDLIV IPRGVVHGTL ATSADFRAMA IKLPPQRSGD TQKVP
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