| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3281 |
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| Symbol | gcl |
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| ID | 1222145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3530896 |
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| End bp | 3532671 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637239698 |
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| Product | glyoxylate carboligase |
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| Protein accession | NP_521400 |
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| Protein GI | 17547998 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3960] Glyoxylate carboligase |
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| TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.819791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGA TGAGAGCGAT CGACGCCGCC GTTGCGGTGC TGGAGCAGGA AGGCATTACC
ACGGCCTTCG GCGTGCCCGG CGCCGCCATC AACCCGCTGT ATTCGGCGCT GCGCCGCGCC
GGCAGCATCG ACCACGTGCT GGCCCGCCAT GTCGAGGGCG CCTCGCACAT GGCCGAGGGC
TACACCCGTG CCGAGCCGGG CAACATCGGC GTGTGCATCG GCACCTCGGG GCCGGCCGGC
ACCGACATGA TCACCGGCCT GTATTCGGCC TGGGCGGACT CGATTCCCAT CCTCTGCATC
ACCGGCCAGG CGCCGCGCGC ACGGCTGTAC AAGGAAGACT TCCAGGCCGT CGACATCGAG
TCGATCGCCA AGCCGGTCAC CAAGTGGGCC GTGACGGTGC GCGAGCCGGC GTTGGTGCCG
CGCGTGTTCC AGCAGGCCTT CCACCTGATG CGCTCGGGCC GGCCGGGGCC GGTGCTGATC
GACCTGCCGT TCGACGTGCA GGTCGCCGAG ATCGAGTTCG ACCCCGACAC CTACGCCCCG
CTGCCCGTCT ACAAGCCCGC CGCCACGCGC GCCCAGGCCG AACGTGCCAT CGCGATGCTG
TGCGCGGCCG AGCGCCCGCT GCTGGTGTGC GGCGGCGGCG TCATCAACGC CGACGCGGCC
CGGCTGATGG CCGAGTTCGC CGAGCTGGTG AACGTGCCGG TGGTGCCCAC GCTGATGGGC
TGGGGCGTGC TCGCCGACGA TCACCCGCTC AACGCCGGCA TGGTCGGCCT GCAGACCTCG
CACCGCTACG GCAACGCCAA CCTGCTCGCC TCGGACTTCG TGTTCGGCAT CGGCAACCGC
TGGGCCAACC GCCATACCGG CAGCATCGAC GTCTACACGA AGGGCCGCAC GTTCATCCAC
GTGGATATCG AGCCCACGCA GATCGGCCGC GTGTTCGGCC CGGACCTGGG CATCGTGTCG
GATGCGAAGG CCGCGCTGGA GCGGTTCATT GACGTGGCGC GCGAGTGGAA GGCCGCCGGC
AAGCTGCCGT GCCGCCGGGC CTGGAACGCC GACGTGCAGA AGCGCAAGCG CACCCTGCTG
CGCCGCTCGG ATTTCGACGA CGTGCCGATC AAGCCGCAGC GCGTGTACCG CGAGATGAAC
CGGTACTTCC CGCGCGACGT CCGCTACGTG AGCACGATCG GCCTGTCGCA GATCGCCGCC
GCGCAGTTCC TGTCGGTCAA CCAGCCGCGC CACTGGATCA ACTGCGGCCA GGCCGGCCCG
CTGGGCTGGA CGATCCCCGC CGCGATCGGC GTGAAGGTGG CCTCGCCCGG CAGCGACGTG
GTGGCCATCT CGGGCGACTA CGACTTCCAG TTCATGATCG AAGAGCTGGC CGTGGCCGCG
CAGTTCAAGG TGCCCTACAT CCACGTGGTG GTGAACAACG CCTACCTGGG CCTGATCCGC
CAGGCGCAGC GCAACTTCGA CATGGACTAC TGCGTGCAGC TCGCCTTCGA CAACGTCAAC
GCGCCCGGGC TCGACGGCTA CGGCGTGGAC CACGTCAAGG TGGTCGAGGG GCTGGGTTGC
AAGGCCCTGC GCGTATTCAG GCCGCAGGAC ATCGCGCCCG CCTTCGCGCA GGCCCGCCTG
CTGATGGCCG AGCACTCGGT GCCGGTGGTG GTGGAGGTGA TCCTGGAGCG CGTGACCAAC
ATCGCCATGG GCACCGAGAT CGACAACGTG GTCGAGTTCG ACACGCCCCT CGACCTGCAA
GACACGCTGG ACGAAGCCGA AGGCGCCACC ACCTGA
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| Protein sequence | MPKMRAIDAA VAVLEQEGIT TAFGVPGAAI NPLYSALRRA GSIDHVLARH VEGASHMAEG
YTRAEPGNIG VCIGTSGPAG TDMITGLYSA WADSIPILCI TGQAPRARLY KEDFQAVDIE
SIAKPVTKWA VTVREPALVP RVFQQAFHLM RSGRPGPVLI DLPFDVQVAE IEFDPDTYAP
LPVYKPAATR AQAERAIAML CAAERPLLVC GGGVINADAA RLMAEFAELV NVPVVPTLMG
WGVLADDHPL NAGMVGLQTS HRYGNANLLA SDFVFGIGNR WANRHTGSID VYTKGRTFIH
VDIEPTQIGR VFGPDLGIVS DAKAALERFI DVAREWKAAG KLPCRRAWNA DVQKRKRTLL
RRSDFDDVPI KPQRVYREMN RYFPRDVRYV STIGLSQIAA AQFLSVNQPR HWINCGQAGP
LGWTIPAAIG VKVASPGSDV VAISGDYDFQ FMIEELAVAA QFKVPYIHVV VNNAYLGLIR
QAQRNFDMDY CVQLAFDNVN APGLDGYGVD HVKVVEGLGC KALRVFRPQD IAPAFAQARL
LMAEHSVPVV VEVILERVTN IAMGTEIDNV VEFDTPLDLQ DTLDEAEGAT T
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