Gene RSc3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3235 
Symbol 
ID1222098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3493026 
End bp3493931 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content63% 
IMG OID637239653 
Producthypothetical protein 
Protein accessionNP_521356 
Protein GI17547954 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0158145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATGT TGCCGATTAT CTCTGCTGAT CGACGTCTGG CCGAGCGGCG TGGCGTCAAG 
GGCGTGCTGG TGGGCAAGAG CGGGCTCGGA AAGACTTCGC AGCTCTGGAC CCTGCCGTCC
GAAACCACGC TGTTTCTCGA TCTGGAAGCC GGTGACCTGG CTGTCGAAGG TTGGGGCGGC
GACACCATTC GGCCCCGCAC CTGGCAGGAG TGCCGTGACT TCGCTGTTTT CATCGGCGGG
CCAAATCCGG CACTGCGCGA CGAGCAGCCG TTCAGCCAAG CCCACTATGA CGCGGTCTGC
GCGCGTTATG GCGACCCGGC CCAGCTCGCC AAGTACCAGA CCGTCTTCGT CGACTCGATC
ACGGTCGCAG GCCGGTTGTG CATGCAGTGG TGCAAGGGCC AACCGCAGGC TTACTCGGAG
AAGACCGGCA AACCGGACAA TCGCGGCGCT TATGCACTGA TGGGGCAGGA GATGATCGCC
TGGCTCACGC ATCTGCAGCA TACGCGCGGC AAGAACGTCT GGTTCGTCGG CATCCTCGAG
GAAAGACTCG ACGACTACAA CCGCCGCATC CAGCAGTTGC AGATCGATGG TTCCAAAACC
GGGCTGGAGT TGCCCGGCAT CGTCGACGAG GTCGTCACGC TCGCCGAATT CAAAGCCGAG
GATGGTTCCA GCTATCGCGC TTTTGTCTGC CACACCCTGA ATCCCTGGGG GTATCCGGCC
AAGGACCGTT CCGGCCGCCT CGATCTGATC GAGGAGCCTG ATCTCGGCCG CCTCATGCAG
AAAATTTCCG GCCCCGCCCG TCCTGTAGGC GAACGGCTCG ACTTCACGCA CCCCAGTGCC
GAGCACGCCA GTGTCGCCCC GAACGCAGCC GCAAACACCA CCGAATACGC AGAACACACC
GCATGA
 
Protein sequence
MSMLPIISAD RRLAERRGVK GVLVGKSGLG KTSQLWTLPS ETTLFLDLEA GDLAVEGWGG 
DTIRPRTWQE CRDFAVFIGG PNPALRDEQP FSQAHYDAVC ARYGDPAQLA KYQTVFVDSI
TVAGRLCMQW CKGQPQAYSE KTGKPDNRGA YALMGQEMIA WLTHLQHTRG KNVWFVGILE
ERLDDYNRRI QQLQIDGSKT GLELPGIVDE VVTLAEFKAE DGSSYRAFVC HTLNPWGYPA
KDRSGRLDLI EEPDLGRLMQ KISGPARPVG ERLDFTHPSA EHASVAPNAA ANTTEYAEHT
A