Gene RSc3232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3232 
Symbol 
ID1222095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3491314 
End bp3491862 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content62% 
IMG OID637239650 
Productputative bacteriophage-related protein 
Protein accessionNP_521353 
Protein GI17547951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00550197 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGAAGG ATGCAATCCA TCAACTGGAG TCGCGCCGGG TGATACAGCG TCGCACCCGC 
CTGCCCTTGT CCGTCCGGCT ATGGAGCCGG GTCGACATGA GTGCTGGCCC GGATGGCTGC
TGGCTGTGGC AGGGGAGCGT CAATGCGAAA GGTTATGGGC AAATTCGACG CGAACCAGAA
GGCAACGCCA TTCGTGGAGT GAAATGCAGC ACCCACCGGA TGGCGTGGGA GCTGACGTAT
GGCGCCATCC CGGACGGCCT GCACGTTTGT CATCGCTGCG ATAACCCCTG CTGCGTGAAT
CCTTCGCATC TGTGGCTGGG CACCCACGCC GACAACCTGG CCGACATGAG AGTCAAGGGG
CGCGCCGCGC GCGGAGACCG CAGCGGTACC GCTCGCCTGG AAAGCAAGCA GGTGCAAATC
ATCAAGCGGC TCCTGTATCT CGGCCACTGC AGCGCGCTCG AAGTCTCCAT CCTGCTCGGC
GTGAGTCCCG CCACGGTTGA AGCCATCCGA AATCAGAAAA CATGGGGGCA CGTCGATGCT
CGACTTTAA
 
Protein sequence
MQKDAIHQLE SRRVIQRRTR LPLSVRLWSR VDMSAGPDGC WLWQGSVNAK GYGQIRREPE 
GNAIRGVKCS THRMAWELTY GAIPDGLHVC HRCDNPCCVN PSHLWLGTHA DNLADMRVKG
RAARGDRSGT ARLESKQVQI IKRLLYLGHC SALEVSILLG VSPATVEAIR NQKTWGHVDA
RL