Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3232 |
Symbol | |
ID | 1222095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3491314 |
End bp | 3491862 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637239650 |
Product | putative bacteriophage-related protein |
Protein accession | NP_521353 |
Protein GI | 17547951 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00550197 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAGAAGG ATGCAATCCA TCAACTGGAG TCGCGCCGGG TGATACAGCG TCGCACCCGC CTGCCCTTGT CCGTCCGGCT ATGGAGCCGG GTCGACATGA GTGCTGGCCC GGATGGCTGC TGGCTGTGGC AGGGGAGCGT CAATGCGAAA GGTTATGGGC AAATTCGACG CGAACCAGAA GGCAACGCCA TTCGTGGAGT GAAATGCAGC ACCCACCGGA TGGCGTGGGA GCTGACGTAT GGCGCCATCC CGGACGGCCT GCACGTTTGT CATCGCTGCG ATAACCCCTG CTGCGTGAAT CCTTCGCATC TGTGGCTGGG CACCCACGCC GACAACCTGG CCGACATGAG AGTCAAGGGG CGCGCCGCGC GCGGAGACCG CAGCGGTACC GCTCGCCTGG AAAGCAAGCA GGTGCAAATC ATCAAGCGGC TCCTGTATCT CGGCCACTGC AGCGCGCTCG AAGTCTCCAT CCTGCTCGGC GTGAGTCCCG CCACGGTTGA AGCCATCCGA AATCAGAAAA CATGGGGGCA CGTCGATGCT CGACTTTAA
|
Protein sequence | MQKDAIHQLE SRRVIQRRTR LPLSVRLWSR VDMSAGPDGC WLWQGSVNAK GYGQIRREPE GNAIRGVKCS THRMAWELTY GAIPDGLHVC HRCDNPCCVN PSHLWLGTHA DNLADMRVKG RAARGDRSGT ARLESKQVQI IKRLLYLGHC SALEVSILLG VSPATVEAIR NQKTWGHVDA RL
|
| |