| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3169 |
|---|
| Symbol | |
|---|
| ID | 1222032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 3428813 |
|---|
| End bp | 3429193 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637239587 |
|---|
| Product | putative transport, fragment transmembrane protein |
|---|
| Protein accession | NP_521290 |
|---|
| Protein GI | 17547888 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCA CAGTAGATGA GGGGACAGCC GTGCCCGTGG AGAAAAAGGC TCCACGAATC
GGCCTGGCAT GGCAGATCGC TATTGGCCTG ACCGCAGGGG TGCTGGTTGG CTTCGTGCTG
AGTCAGTACC CAGCCTTGCG CGAGTCGGTC ATCAGTGACT ACCTTCAGCC AGCAGGGGAC
TTGTTCATCA AGTTGATCAA GATGATCGTG GTTCCCATTG TGCTGACAAG CATGATCGTC
GGTATCGCTG GCGTGGGAGA CGGGAAATCC CTGGGACGGA TTGGTCTTAA GACGCACCCC
TTTCAAGGTC TTTCCGCCCG GGCCTTTTTG AGTACGCGGG CAGTGCAGAC ATGGGCTCGG
GCGATGCTGC CGTCCACATA G
|
|---|
| Protein sequence | METTVDEGTA VPVEKKAPRI GLAWQIAIGL TAGVLVGFVL SQYPALRESV ISDYLQPAGD
LFIKLIKMIV VPIVLTSMIV GIAGVGDGKS LGRIGLKTHP FQGLSARAFL STRAVQTWAR
AMLPST
|
|---|
| |