Gene RSc3157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3157 
Symbol 
ID1222020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3411565 
End bp3412401 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content62% 
IMG OID637239575 
Producthypothetical protein 
Protein accessionNP_521278 
Protein GI17547876 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAATA AAACCCACGA AATCCGCCCG AACCAGTCGA TCGAGTTGCT GAAGGAACTG 
CACATCCTGA CGCGCGACGG CAAGATGAAT CAGGACAGCC GCCGCAAGCT GAAGCAGGTC
TATCACCTGT TCCAGTTCAT CGAGCCGCTG CTCGACGACG TACAGAAAGC GAAGGGACAT
GTATCGCTTG TCGATCACGG CGCGGGCAAG TCGTACCTCG GCTTCATCCT CTACGACCTG
TTCTTCAAAG AGCAACCCGG CGACGGTGCT TCGCACATCT ATGGCATCGA AACGCGCGAA
GCGCTCGTGG CGAAGTCGAC CGAGCTCGCG GCGCGGCTCG GCTTCAAGGG GATGTCGTTT
CTGAACGTGT CGGTGGCGGA ATCGATCACG TCGGAGCGCC TACCGCCTGC CGTCGACGTC
GTGACCGCGC TGCACGCGTG CAACACCGCC ACCGACGATG CGATCCGCTT CGCGCTCGAA
AAGCATGCGC AGTACATCGT GCTCGTGCCC TGCTGCCAGG CGGAGGTCGC CGGCGTGTTG
CGCCGGAACA AGGGCAAGTC GCTCGGCAAT GCGTTGACGG AAATCTGGCG TCATCCGCTG
CATACGCGCG AATTCGGCAG CCAGGTCACA AACGTGCTGC GCTGCCTGCA GCTCGAAGCC
CACGGCTATC AGGTGAGCGT GACGGAGCTC GTCGGCTGGG AGCATTCGAT GAAAAACGAG
CTGATCGTTG CGCAGTACAA AGACCTGCCT CGGCGGCGTC CGACTGAGCG GCTCGCTGAA
GTGCTCAGCA CGCTCGGCCT CGAAGAACTG CGCGAGCGCT TCTTTGCGCC GGCGTGA
 
Protein sequence
MSNKTHEIRP NQSIELLKEL HILTRDGKMN QDSRRKLKQV YHLFQFIEPL LDDVQKAKGH 
VSLVDHGAGK SYLGFILYDL FFKEQPGDGA SHIYGIETRE ALVAKSTELA ARLGFKGMSF
LNVSVAESIT SERLPPAVDV VTALHACNTA TDDAIRFALE KHAQYIVLVP CCQAEVAGVL
RRNKGKSLGN ALTEIWRHPL HTREFGSQVT NVLRCLQLEA HGYQVSVTEL VGWEHSMKNE
LIVAQYKDLP RRRPTERLAE VLSTLGLEEL RERFFAPA