Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3120 |
Symbol | |
ID | 1221984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3360086 |
End bp | 3360769 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637239538 |
Product | hypothetical protein |
Protein accession | NP_521241 |
Protein GI | 17547839 |
COG category | [R] General function prediction only |
COG ID | [COG3467] Predicted flavin-nucleotide-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGT CCGAGTCCCC CCCCCCGTCC GCGCGCACCC GCGTGCGCCG TGTCGCCCAG CGCGGATGCT ATGACCGCGC AACGCTCTAC GCCATCATCG ACGCGGCCTA TGTGTGCCAC CTCGCCTTTG CCGATGCGCA GGGCGTGCAC TGCATCCCCA CCGCGTGCTG GCGCGAGGGC GATCACCTCT ACATCCACGG CTCCAACGGC AGCCGCATGC TGAAGCTGGC GGCCGACGGC GCGCAGGTGT GCGTGACCAT CACGCACCTG GACGGCCTGG TGCTGGCGCG CTCCGCGTTC CACCATTCGA TGAACTACCG CTCGGCCGTC ATCTACGGCG CCTTCAAGGC GGTGGACGGC GCAGCCAAGG CCGCCGCGCT CGACACCTTC GTCGACTTCA TCGCCCCCGG CCGCGTGCGC GAGGTCCGCC CCGGCAATGC CAAGGAACTG GCGGCGACCA CCGTGCTGCG CATCCCGCTC GATGAGGCGG CCGCCAAGAT CCGCACCGGC GGCCCCAAGG ACGACGAAGC GGACCTGGGC CTGCCGGTCT GGGCCGGTGT GCTGCCGATG GCGCTGCAGC CCCTGTCCCC CATCGCGGAT GCCGCGCCCG CCGGCACCCC CGGGTACGTG CGGCAGTGGC AGGCCGGCCC TCGCGAAACC GCCGTCGAGC CGATGGTGCC CTGA
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Protein sequence | MTQSESPPPS ARTRVRRVAQ RGCYDRATLY AIIDAAYVCH LAFADAQGVH CIPTACWREG DHLYIHGSNG SRMLKLAADG AQVCVTITHL DGLVLARSAF HHSMNYRSAV IYGAFKAVDG AAKAAALDTF VDFIAPGRVR EVRPGNAKEL AATTVLRIPL DEAAAKIRTG GPKDDEADLG LPVWAGVLPM ALQPLSPIAD AAPAGTPGYV RQWQAGPRET AVEPMVP
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