Gene RSc3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3100 
Symbol 
ID1221964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3337759 
End bp3338154 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content70% 
IMG OID637239518 
Producthypothetical protein 
Protein accessionNP_521221 
Protein GI17547819 
COG category[S] Function unknown 
COG ID[COG4319] Ketosteroid isomerase homolog 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG ACGAACGCGC CATCCGGGCC GTCGTGACCG ACTGGCTCGC CGCCAGCCAG 
GCCGGCGACC TGCAGGCGGT CCTGAACCTG ATGACGGACG ATGTGGTCTT CCTCGTACCC
GGGCAGCCGC CCTTCGGCAA GCAGGCCTTC GCGGCCATGT CCGAGGGCAT GAAGGCGGTG
CGCATCGAGG GCACGAGCGA CATCCAGGAG GTCCGGGTGT TCGGTGACGT GGCCTACCTG
CGCAACCATC TGCGCATCAC CATCACGCCA CTGGGAGGCG GCCCCGCGAT GCATCGGTCC
GGCCCGGCCC TGTCGATCCT GCGCAAGGAG GCCGACGGGC GATGGCGGCT GGCGCGGGAC
GCCAACCTGG TGGTACCCGA CCCGGAGCCG GCCTGA
 
Protein sequence
MTDDERAIRA VVTDWLAASQ AGDLQAVLNL MTDDVVFLVP GQPPFGKQAF AAMSEGMKAV 
RIEGTSDIQE VRVFGDVAYL RNHLRITITP LGGGPAMHRS GPALSILRKE ADGRWRLARD
ANLVVPDPEP A