| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3069 |
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| Symbol | |
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| ID | 1221932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3307878 |
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| End bp | 3309164 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637239486 |
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| Product | putative transporter transmembrane protein |
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| Protein accession | NP_521190 |
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| Protein GI | 17547788 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.517563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.927343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCTC CCGCCAGCTC GTCCGCCACG CCTGTCCCCA CCGCCCACGT CACCCACGCC
ACGATGGAGC CCGCCGATCC GGCGCGCTGG CTGGTGCGCG GCTCGCCGGG GTATCGCCGG
GCCAACCTGG CGCTGTTCGC CGCCGGCTTC TCGACCTTCT CGCTGTTGTA TTGCGTGCAG
CCGCTGATGC CGCTGCTGGG GCACGACTTC GGCCTGTCCC CCGCGCAGAC GAGCCTGGTG
CTGTCGGCCA CGACGATGCT GCTGGCCTTC GCCATCCTGT TCGCGGGGCT GCTGTCGGAG
TCGATCCACC GCAAGACGCT GATGGGCGTT TCGCTGGTGC TGTCCTCGGC GCTGACGGTG
GCGGCGGCCG TGCTGCCCGG CTGGCAGGGG CTGCTGGCCA CGCGCGCGGT GCTCGGCGTC
GTGCTGGGCG GTGTGCCGGC GGTGGCGATG GCCTATCTGG CCGAAGAGGT GCATCCGCAG
GGCCTGGGCA TGGCGATGGG GCTGTACGTG GGCGGCACCG CTTTCGGCGG CATGGCTGGG
CGCGTGCTGA CCGGCATGGT GGCCGACTAC GCCGGCTGGC GCGTCGCCAT GGGCTTCATC
GGGGCGCTGT GCCTGCTGGC GGCGCTGGCC TTTGCCTGGC TGCTGCCGCC GTCGCGCCGG
TTCGCGCCGC GCCGGGGTGT GGCGCTCGCC GATCTCTTCG ATACGCTCGC CGAGCACCTG
CGCGAGCCCG GCCTGCGTGC GCTGTTCGCC ATGGCCTTCC TGCTGATGGG CGGCTTTGTC
ACGATCTACA ACTACGCCAG CTACCGGCTG CTGAGCGCGC CGTATGCACT GAGCCATTCG
GCGGTCGGGG CGATCTTCAT GGTGTACCTG CTGGGCATCG GCGCATCGAC CTGGTTCGGG
CGACTGGCCG ATCGGCATGG CCGGGGCCGG GTGCTGCTGG CCGGCACGGC GGCGATGTCG
GCGGGCGTGT TGATGACGCT GGCGATGCCG CTGGGGCTGG TGATCGGCGG CATCGCGCTG
CTGACCTTCG GTTTCTTCGG CGCGCACGCG GTGGCGAGCG GCTGGGTCGG GCGCCGTGCC
AGGCGGGCCA AGGGACAGGC GGCGGCGCTG TACTTGCTGG CGTACTACCT CGGCTCGAGC
ATCGCCGGCA CGGCGGGCGG CAAGCTCTAC GCGCGGTGGG GCTGGCCTGG TGTGGTGGCG
CTGGTGACGG CGATGTTGGC CTGCGCCCTG CTGACGGCCG CATGGCTGTG GCGGCGCGCG
CCGTTGCCGC CGGGCGCCGC GCGCTGA
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| Protein sequence | MNAPASSSAT PVPTAHVTHA TMEPADPARW LVRGSPGYRR ANLALFAAGF STFSLLYCVQ
PLMPLLGHDF GLSPAQTSLV LSATTMLLAF AILFAGLLSE SIHRKTLMGV SLVLSSALTV
AAAVLPGWQG LLATRAVLGV VLGGVPAVAM AYLAEEVHPQ GLGMAMGLYV GGTAFGGMAG
RVLTGMVADY AGWRVAMGFI GALCLLAALA FAWLLPPSRR FAPRRGVALA DLFDTLAEHL
REPGLRALFA MAFLLMGGFV TIYNYASYRL LSAPYALSHS AVGAIFMVYL LGIGASTWFG
RLADRHGRGR VLLAGTAAMS AGVLMTLAMP LGLVIGGIAL LTFGFFGAHA VASGWVGRRA
RRAKGQAAAL YLLAYYLGSS IAGTAGGKLY ARWGWPGVVA LVTAMLACAL LTAAWLWRRA
PLPPGAAR
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