Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3055 |
Symbol | |
ID | 1221918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3292237 |
End bp | 3292650 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637239472 |
Product | hypothetical protein |
Protein accession | NP_521176 |
Protein GI | 17547774 |
COG category | [R] General function prediction only |
COG ID | [COG5573] Predicted nucleic-acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.187147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCGA CTGAGGCATT CTTCGACAGC AATGTCGTGC TGTACCTGCT GTCGGCCGAC ACCGCCAAGG CCGATGCGGC GGAAACGCTG CTGATGACCG GCGGTGTCGT CACCGTACAG GTACTGAACG AAACGACGCA CGTGATGCGC CGCAAGCTCG CCATGCCGTG GCACGCGATC GAAACGGTGC AGGAGGCCGT GCGTGCGCAA TGCCGGGTCG AGCCGCTGAC GCTCGAAACC CATGATCTCG GACGGCGTAT CGCAGAACGC TACGGATTGT CGGTCTATGA TGCACTGATC GTCGCGGCGG CATTGCTTGC CGGCTGCAAC GTTCTGTATT CCGAGGATAT GCAGCACGGC CTGGTGATCG AGCAGCATCT GCGCATCGTC AATCCTTTTC CGGCACGGGC ATGA
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Protein sequence | MPATEAFFDS NVVLYLLSAD TAKADAAETL LMTGGVVTVQ VLNETTHVMR RKLAMPWHAI ETVQEAVRAQ CRVEPLTLET HDLGRRIAER YGLSVYDALI VAAALLAGCN VLYSEDMQHG LVIEQHLRIV NPFPARA
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