Gene RSc2955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2955 
Symbol 
ID1221809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3184160 
End bp3184948 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content65% 
IMG OID637239363 
Producthypothetical protein 
Protein accessionNP_521076 
Protein GI17547674 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.279885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA TTCCGCAGAT CCGCCCGGGC CGCTGGACCG GCTTTCGCAC GCTGCTGTAC 
AAGGAAGTGC TGCGCTTCTG GAAGGTCAGC TTCCAGACCG TGGCCGCGCC GGTGTTGACC
GCGCTGCTGT ACCTGCTGAT CTTCGGCCAC GTGCTGGAAG ACCACGTGCA GGTGTTCGGC
CAGATCGGCT ACACCGCGTT CCTGATCCCG GGCCTGGTGA TGATGAGCGT GCTGCAGAAC
GCGTTCGCCA ACAGCTCGTC GTCGCTGATC CAGTCGAAGA TCACGGGCAA CCTGGTGTTC
ATCATGCTGC CGCCGCTGTC GCACTGGGAG ATGTTCGGCG CGTACGTGGT TGCCTCGGTG
ATCCGCGGGC TGGCGGTGGG CGCGGGCGTG CTCGTCGTGA CGGCGTGGTT TGCCCACCTG
CACTTCGCGC AGCCGCTGTG GATCATCGTC TTCGCCATCC TGGGCGCGGC CGTGCTCGGG
ACGCTGGGGC TGATCGCCGG CATCTGGGCC GAGAAGTTCG ACCAGCTCGC GGCGTTCCAA
AATTTCCTGA TCGTGCCGGC CACTTTCCTG GCGGGCGTGT TCTATTCGAT CCATTCGCTG
CCCGCCTTCT GGCAGGTGGT GTCCCACGCC AACCCGTTCT TCTACATGAT CGACGGCTTC
CGCTACGGCT TCTTCGGGGT GTCCGACGTG CCGGTGGCGA CCAGCCTCGG CGTGATGGTG
GTCGCGCTGG TCGTGGTGGG GGGGATCGCC CTGCAGATGC TTCGCACGGG CTACAAGCTG
CGCCATTGA
 
Protein sequence
MSAIPQIRPG RWTGFRTLLY KEVLRFWKVS FQTVAAPVLT ALLYLLIFGH VLEDHVQVFG 
QIGYTAFLIP GLVMMSVLQN AFANSSSSLI QSKITGNLVF IMLPPLSHWE MFGAYVVASV
IRGLAVGAGV LVVTAWFAHL HFAQPLWIIV FAILGAAVLG TLGLIAGIWA EKFDQLAAFQ
NFLIVPATFL AGVFYSIHSL PAFWQVVSHA NPFFYMIDGF RYGFFGVSDV PVATSLGVMV
VALVVVGGIA LQMLRTGYKL RH