Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2955 |
Symbol | |
ID | 1221809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3184160 |
End bp | 3184948 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637239363 |
Product | hypothetical protein |
Protein accession | NP_521076 |
Protein GI | 17547674 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.279885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCA TTCCGCAGAT CCGCCCGGGC CGCTGGACCG GCTTTCGCAC GCTGCTGTAC AAGGAAGTGC TGCGCTTCTG GAAGGTCAGC TTCCAGACCG TGGCCGCGCC GGTGTTGACC GCGCTGCTGT ACCTGCTGAT CTTCGGCCAC GTGCTGGAAG ACCACGTGCA GGTGTTCGGC CAGATCGGCT ACACCGCGTT CCTGATCCCG GGCCTGGTGA TGATGAGCGT GCTGCAGAAC GCGTTCGCCA ACAGCTCGTC GTCGCTGATC CAGTCGAAGA TCACGGGCAA CCTGGTGTTC ATCATGCTGC CGCCGCTGTC GCACTGGGAG ATGTTCGGCG CGTACGTGGT TGCCTCGGTG ATCCGCGGGC TGGCGGTGGG CGCGGGCGTG CTCGTCGTGA CGGCGTGGTT TGCCCACCTG CACTTCGCGC AGCCGCTGTG GATCATCGTC TTCGCCATCC TGGGCGCGGC CGTGCTCGGG ACGCTGGGGC TGATCGCCGG CATCTGGGCC GAGAAGTTCG ACCAGCTCGC GGCGTTCCAA AATTTCCTGA TCGTGCCGGC CACTTTCCTG GCGGGCGTGT TCTATTCGAT CCATTCGCTG CCCGCCTTCT GGCAGGTGGT GTCCCACGCC AACCCGTTCT TCTACATGAT CGACGGCTTC CGCTACGGCT TCTTCGGGGT GTCCGACGTG CCGGTGGCGA CCAGCCTCGG CGTGATGGTG GTCGCGCTGG TCGTGGTGGG GGGGATCGCC CTGCAGATGC TTCGCACGGG CTACAAGCTG CGCCATTGA
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Protein sequence | MSAIPQIRPG RWTGFRTLLY KEVLRFWKVS FQTVAAPVLT ALLYLLIFGH VLEDHVQVFG QIGYTAFLIP GLVMMSVLQN AFANSSSSLI QSKITGNLVF IMLPPLSHWE MFGAYVVASV IRGLAVGAGV LVVTAWFAHL HFAQPLWIIV FAILGAAVLG TLGLIAGIWA EKFDQLAAFQ NFLIVPATFL AGVFYSIHSL PAFWQVVSHA NPFFYMIDGF RYGFFGVSDV PVATSLGVMV VALVVVGGIA LQMLRTGYKL RH
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