| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2868 |
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| Symbol | dppC1 |
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| ID | 1221716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3090411 |
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| End bp | 3091325 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637239270 |
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| Product | peptide ABC transporter permease |
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| Protein accession | NP_520989 |
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| Protein GI | 17547587 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0655134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.760664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGACTT CCACCACCGC GACCGCCAGG CCGGCCGCAG AAGAAACGCC GCTGCGCCGC
TTCGTGCGCC AGTTCTGCGC CAGCCGCGCG GCGGTGATCG GCGTGATCGT GCTGGCGATC
ATCATTGTCG TGGCGTTGGC GGCGCCGTGG ATTGCGCCGC AGAACCCGTA CGATCTGTCC
AGGCTCGACG TGCTCGATTC GCGCCTCGCG CCCGGCGAGA AATCCGGCGA TGGCATGATC
TTCCTGCTCG GCTCGGATGA CCAGGGGCGC GACATCCTGT CCGCCATCCT CTATGGCCTG
CGTATCAGCG TGGGCGTGGG CGCGGTGAGC ACGGTGATCG CGCTGGCGCT GGGCACGGTG
CTGGGGCTGA TCGCCGGCTT CGCGGGCGGG CGCATCGAAT CGCTCATCAT GCGGATCGCC
GACCTGCAGC TGTCGTTTCC GCCGATCCTG CTGGCGCTGA TCCTGCTGGC GCTGCTCAGG
CCGGGCCTGG CCAACATCGT GATCGCGCTG GTGGCGGTGC AATGGGCGTA CTACGCGCGC
ACCACGCGCA GCGCGGCGCT GGTGGAGCGC CGGCGCGAAT ACATCGAGGC GGCGCAGGTG
CTGGGCCTGC CGCCGTCGCG CATCATGTTC CGCCATCTGC TGCCGAACTG CCTGCCGCCG
CTGATCGTGA TCGCGGCGCT GCAGGTGGCT TCGGCGATCA CGCTGGAGGC GACGCTGTCG
TTCCTGGGGC TGGGGGTGCC GATCACCGAG CCGTCGCTGG GGCTGCTGAT CGCCAACGGC
TTCCAGTACA TGCTGTCGGG CAAGTACTGG ATCAGCTTCT TTCCCGGCCT GGCGCTGCTG
CTGACCATCG TGTCGATGAA CCTGGTCTCG GACCAGCTCC GCGACGTGCT CAACCCCCGC
CTGCAGACGC TATGA
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| Protein sequence | MTTSTTATAR PAAEETPLRR FVRQFCASRA AVIGVIVLAI IIVVALAAPW IAPQNPYDLS
RLDVLDSRLA PGEKSGDGMI FLLGSDDQGR DILSAILYGL RISVGVGAVS TVIALALGTV
LGLIAGFAGG RIESLIMRIA DLQLSFPPIL LALILLALLR PGLANIVIAL VAVQWAYYAR
TTRSAALVER RREYIEAAQV LGLPPSRIMF RHLLPNCLPP LIVIAALQVA SAITLEATLS
FLGLGVPITE PSLGLLIANG FQYMLSGKYW ISFFPGLALL LTIVSMNLVS DQLRDVLNPR
LQTL
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