| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2815 |
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| Symbol | |
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| ID | 1221662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3028303 |
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| End bp | 3029040 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637239216 |
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| Product | putative signal peptide protein |
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| Protein accession | NP_520936 |
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| Protein GI | 17547534 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0642085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.24784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCT TCCCGGTCCG CCTGATCGCC GCCACGCTGT GCGCGGTGGC GCTGCTCGCG
GGTACGCGCT CGGCGTGGGC GGGTGCGCAG AAAGAGGAAT ACCTGGCCGA CTCGGTGCGC
AGCGCGCTGT CCGCCGCCGT GGCCGACAGC CGTCCGCTGC GCCCGGTGTT TGCCAGCAAC
GAAGAGCAGC TCGGCTACCT GCGCTGGCTG GCGGAGATGT CGGCGCGCAT GTCCGCCAAG
ATTCCGCTGG CATCGGTCCG CGTCGAGCTG ATCGAGACGG CGTACTACGA GGCCAAGCGG
GCGGGGCTGG ATCCGGCGCT GGTGCTCGGC CTGATCCAGG TGGAAAGCGG CTTCCGCAAG
TACGCCATGA GCGGCGCCGG CGCCATGGGC CTGATGCAGG TGATGCCGTT CTGGACGCGC
AGCATCGGCG ACAAGGACGT GCGCAAGCTG TTCCACCTGC AGAGCAACCT GCGCTACGGC
TGCACCATCC TCCGGCACTA CCTCGACATG GAGGGCGGCA ACCTCTACCT GGCGCTGGGC
CGCTACAACG GCAGCCGCGG CCAGCCGCAA TATCCGAACG CCGTGCTGGC GGCCTGGAAG
CGCTGGCAGT ATCAGGATGC AACGGTGACG ACCGTGTCCG CGCCCGCGCC GTCGGGGGCC
GCGCCGCGCG CCAAGGCGCT GCCGGACTCG CCGGCGCGCA ATCCGTTCTC GCCGCTGCGC
ATCGCCGGCG GTTCCTGA
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| Protein sequence | MRRFPVRLIA ATLCAVALLA GTRSAWAGAQ KEEYLADSVR SALSAAVADS RPLRPVFASN
EEQLGYLRWL AEMSARMSAK IPLASVRVEL IETAYYEAKR AGLDPALVLG LIQVESGFRK
YAMSGAGAMG LMQVMPFWTR SIGDKDVRKL FHLQSNLRYG CTILRHYLDM EGGNLYLALG
RYNGSRGQPQ YPNAVLAAWK RWQYQDATVT TVSAPAPSGA APRAKALPDS PARNPFSPLR
IAGGS
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