Gene RSc2796 details

Gene Information

• Locus tag: RSc2796
• ID: 1221643
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 3005603
• End bp: 3006352
• Gene Length: 750 bp
• Protein Length: 249 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 637239197
• Product: putative hemagglutinin-related transmembrane protein
• Protein accession: NP_520917
• Protein GI: 17547515

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0145136
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.687203
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCGCAC CCGCCTTCTT GTTGAGATCG AGCCCACCGA GTCGTGGGGT TTTCCCGCAG 
TACCGGCGGT TGGCACGGCG GACGCCGGGC ATCCTGGTGA TCGTGTCGCT GGTCGGGATC 
GCAGGCTGCG CCACGTCGGA CAGCGGTGAC ATGGGCACAT CGCTAGGCGG CAGCGGCTCG 
CAGTCGACGT TATCGCTGAC GGTACCGGAT TCACCGACCT GGTCGAACGA CAGCGGCACG 
ACCGACAGCA GCAGCAGCGG CGCGGCCGGC AGCACCACGC CGGTTGAGCA GGTCACGACC 
GTTGCCGTCA CCGCCATCCT GCCGCTCGCC AGCACGCTGA CCTCGGCCAC GCAGACGCTC 
GGCGCGACCA CCGGGCTCGG CGCACCGGTG AGCAGCGTGC TGACGACGCT GGGCAGCGCG 
CTCGGCAGCG AAGGCGGCAC CCTCACCCAG GCCGGCAAGG GCAATGCGCT GACATCCACG 
CTGGGCAGCA CGGTGAGCGC GCTGGGCACG CTCACCGATT CGCTCGCCGC GGTGGCGACG 
CCGGCCGCCT CGTCATCCGG CGGCAGCGCG CCGGGCGGCG CGCTGGGGAA TGCGCTGGCC 
CCCGTGATCA CGGCCGTCGG CAGCCTGACG GCCAGCCTGT CCGGTGCCGG CACGGGCAGT 
CCGCTGGGCG CACTGGGCAG CGCCGGCACG ACGCTCGGCG GACTGGTCGG CGGCGGGCTG 
TCGGGTGTCG TGCCCGATAC GCGCCACTAG 

 

Protein sequence

MRAPAFLLRS SPPSRGVFPQ YRRLARRTPG ILVIVSLVGI AGCATSDSGD MGTSLGGSGS 
QSTLSLTVPD SPTWSNDSGT TDSSSSGAAG STTPVEQVTT VAVTAILPLA STLTSATQTL 
GATTGLGAPV SSVLTTLGSA LGSEGGTLTQ AGKGNALTST LGSTVSALGT LTDSLAAVAT 
PAASSSGGSA PGGALGNALA PVITAVGSLT ASLSGAGTGS PLGALGSAGT TLGGLVGGGL 
SGVVPDTRH