| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2789 |
|---|
| Symbol | |
|---|
| ID | 1221636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 2999569 |
|---|
| End bp | 3000990 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637239190 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_520910 |
|---|
| Protein GI | 17547508 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02098] MJ0042 family finger-like domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.427469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCCG CGCCACGTCT CGCCGCCCGC TGTCCTGCCT GTCATACCGC CTTCCGCGTC
GTCGCCGATC AGCTGCGGCT GCGCGGCGGT CTGGTCCGCT GCGGACGCTG CAATCACGTC
TTCGATGGGC GTGCCCACCT GATCGAGCTC GATACGTCAT CCGGCGAGAG CGCAGCGCAA
GCAGCCGCGC CCCAGCCACC GGAGCGACAT GAGCCGGTAT CCGCCGCCGC GCCCGCGGCC
GCCGAGCCGC ATCCCGCCGA GCCGGCCTCC GCCGATGAAG ACGACCATGG CTTCGGCATC
ACGCTGACCT GGGAAGAGGA GATCGCCGAA GTCCACCTGG GCGAAGTCGA AGGCGCCGAA
GCCGACCCCG GCACGCAGCC GACCGCTCCG GATACGCGCT CGCCGGCCGC ACCGACCACA
CCGGCTGCGC CCGCCGCGCA AGCGGAGCCA CCCAAGGCGA AGCCCAGCAC GCCGGCCGAG
GCCGAGCCGG TGGCGGCGCA ACCGGAAACA CCCGTCGAGC CGCCAGCCCC GGCTGACCCG
TTCCACGGCT TACCGCCGCT GCTCAATCTG GACGACGACG AGGACAACTT CGCCGCCGCC
GTCCCCGTGC GGCCGTCCGC CGAGCCGGTC GCGGCACCAT CGTCCCTGCC GGAACCGCCT
GCCAAGGCGA CCCAGGCCCC GGCTCCAGCC GCTGCCGAGA GGCACGATTC CACCTGGCTG
CGCCGCGAGG CTGATCCGCA TACGCTGTTC GCACCGGTGC CGCGCCGCCA GGGCCGCCGC
GCCCCGGAAG CGGAAGCGCA TGCCGAGCCC ATCCCACAGC GCACCGTCAC CGGCGCCCCG
CGTCCGCGCA AGATGCGCGG GCCGAACCAT GGCGTGTCGG CGGCCACGCT GGATTTCCTG
CGGGCCGCGC AGGCGCGCGA GCAACAGCGC AAGTCTTCGG GCCGCCGTGC CGTGGCGCGG
GTGGCGATCG GCCTGCTGGT GGTGACCGCG GTTGCGCAGT TGCTCTTTCT CGGCCGCACG
GAGATCGCCA CGCGCGTGCC GGCCACGCGC GCGCTGTGGG ATCGCCTGTG CCAGCCGCTG
CACTGCGACG TGCCGCCGCC GCGCGATCTC GATGCGCTGC AGATCGAGTC GTCGCAGATG
CTGCGCCAGG AAGGCGATGC CTCCGACCAG TACGTGCTGA CCGCCACGCT GCGCAACGGC
TCGGACGGCC CGGTCGCGCT GCCCGCCATC GAGCTGGTCA CCACCGACCT GCAGGACCAG
TTGCTGGCGC GCCGCGCGCT GCTGCCCACC GACTACCTGG GCCCCGCCGA CGCGGCCTAT
CGCAAGACCG GCCTGGCCGC CCACGCCGAG TTGCCGATTC GGGTACGATT CCAGTCCCAG
CGCCCGACGG CCAACTACCG GGTCCTGATT TTCTACCCCT GA
|
|---|
| Protein sequence | MASAPRLAAR CPACHTAFRV VADQLRLRGG LVRCGRCNHV FDGRAHLIEL DTSSGESAAQ
AAAPQPPERH EPVSAAAPAA AEPHPAEPAS ADEDDHGFGI TLTWEEEIAE VHLGEVEGAE
ADPGTQPTAP DTRSPAAPTT PAAPAAQAEP PKAKPSTPAE AEPVAAQPET PVEPPAPADP
FHGLPPLLNL DDDEDNFAAA VPVRPSAEPV AAPSSLPEPP AKATQAPAPA AAERHDSTWL
RREADPHTLF APVPRRQGRR APEAEAHAEP IPQRTVTGAP RPRKMRGPNH GVSAATLDFL
RAAQAREQQR KSSGRRAVAR VAIGLLVVTA VAQLLFLGRT EIATRVPATR ALWDRLCQPL
HCDVPPPRDL DALQIESSQM LRQEGDASDQ YVLTATLRNG SDGPVALPAI ELVTTDLQDQ
LLARRALLPT DYLGPADAAY RKTGLAAHAE LPIRVRFQSQ RPTANYRVLI FYP
|
|---|
| |