| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2678 |
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| Symbol | |
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| ID | 1221525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2888002 |
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| End bp | 2888592 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637239079 |
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| Product | type 4 fimbrial biogenesis related transmembrane protein |
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| Protein accession | NP_520799 |
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| Protein GI | 17547397 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.171677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAC GCATGCGTCG ACGGAGCTCG CGGCAGCGCA AGGCAGGCCA GCGCGGGCTG
ACCCTGATCG AGGTGCTGAT CTCGGTGGTG ATCCTGCTGG CGGCCCTGCT GGGTGCGGCC
GGGCTGATCG CACGGTCCAA CCAGTCCGAA ATGGAGTCGT ATCAGCGGGT CCAGGCGCTG
ACGCTGCTGC AGGACATGGT GACCCGGCTC AACGCCAACC GGCAGGCCGC GGCCTGCTAC
GCCGTCGCGG GCACGATCAC GACCGCCGGC AACGGCGGCA CTTCGGTGCC CAGCTGCACG
ACCGGCACCG CAGCCCAGCA GACCCTGGCC CAGACGGACC TGACCGCCTG GAGCACCGAG
CTGATGGGGA GCGCGGAAAG CAGCAGCGGC AACGCGGTCG GCGCCATGAT CGGCGCGCGC
GGCTGCATCG AGGCCATCGA TACCACCAAC CAGATCTACC GCGTGACCGT TGCGTGGCAG
GGGCTGGCCA AGACGGTGTC GTCGTCGTTG CCTTGCGGCA GCGGCAGCTT TACCGACGAC
ACTTATCGAC GCGCCGTCAG TGTCCAGGTG CGCATTGGAG TCCTGTCATG A
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| Protein sequence | MSARMRRRSS RQRKAGQRGL TLIEVLISVV ILLAALLGAA GLIARSNQSE MESYQRVQAL
TLLQDMVTRL NANRQAAACY AVAGTITTAG NGGTSVPSCT TGTAAQQTLA QTDLTAWSTE
LMGSAESSSG NAVGAMIGAR GCIEAIDTTN QIYRVTVAWQ GLAKTVSSSL PCGSGSFTDD
TYRRAVSVQV RIGVLS
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