| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2677 |
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| Symbol | |
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| ID | 1221524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2886977 |
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| End bp | 2887987 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637239078 |
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| Product | putative type 4 fimbrial biogenesis pilw-related protein transmembrane |
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| Protein accession | NP_520798 |
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| Protein GI | 17547396 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.307347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGCC GGCAGCGCGG CATGTCGCTG GTCGAGCTGA TGATCGGGAT GGCGCTCGGC
CTGCTGCTGC TGACGGCGCT GGGCAGCCTG TATTTTTCGA CCACCCAGTC GCGTGCGCAG
CTGGCCAACA GCGCAAGCCA GATCGAGAAC GGCCGCTACG TGCTGGACCT GATCAGTCAG
GAGCTTGGCC TGGCCGGTTT CATGGGGGCG TCGAGCGTGC GCAGCACCGC AGCGCTGTCG
GCGCCCGACG TGTGCACGGT CGCCACCAAC GCGCTCGGTT TCTCGAGCAG CCCCGCGACC
GTGCCGGTGG CGGTATACGG CTATGCGGCC GGAGCGAATG CGCCCTGCCT GCCCAACCTG
TCGGCCAGCT CGGAGATCCT GGTGGTGCGG CGCGTCTCGA CCACGGCCGT CACGACGGCC
ACCGCGGGCG AGGCCTACAT GCAGGCGTCG TTCTGCACCA GCGATACCGT GCCGTTCGTC
TTCAGCTCCA CCGCGACCGA TTTCACGATG CGTACCAAGG CGTGCAGCAG CACGGTACCG
GCCGAGCTGC GGCAGGCCAG CGTGCGCGTG TTCTATATCG CCACGTGCGA CCGCTGCAGC
AACGGCGGCG ACGGCATTCC CACGCTGATG ATGGCGGAGC TCTCGGGCGG CCAATACCTG
TTCAAGCCGA TCGCACAGGG CGTCCAGGAC ATTCATTTCG CCTACGGCGT CGACATGGAC
AACAACGGAT CCGCCGACTG TTACGTGAGC GACCCCGGTG CGGACAACAG CGCCGCCTGC
ACGGCCGTAT CGGGCTACAG CTGGGCGACA TCGCTGACCA ACTGGGGCAA TGTCACGGCG
GTCCGCGTCA ACGTGCTGGC CCGCACGCTG AATATCGCGC CGGGCTGGTC GGACACTCGG
ACCTATGACC TGGGCCGCGG CACGGTGTCC GGTCCGTTCA ATGACGGCTA TAAGCGGCAC
GTCTATGCAG AAGTCGCGCG GCTGGCCAAT GTGGCCGGCC CGAGGGAGTA A
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| Protein sequence | MLRRQRGMSL VELMIGMALG LLLLTALGSL YFSTTQSRAQ LANSASQIEN GRYVLDLISQ
ELGLAGFMGA SSVRSTAALS APDVCTVATN ALGFSSSPAT VPVAVYGYAA GANAPCLPNL
SASSEILVVR RVSTTAVTTA TAGEAYMQAS FCTSDTVPFV FSSTATDFTM RTKACSSTVP
AELRQASVRV FYIATCDRCS NGGDGIPTLM MAELSGGQYL FKPIAQGVQD IHFAYGVDMD
NNGSADCYVS DPGADNSAAC TAVSGYSWAT SLTNWGNVTA VRVNVLARTL NIAPGWSDTR
TYDLGRGTVS GPFNDGYKRH VYAEVARLAN VAGPRE
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