| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2657 |
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| Symbol | |
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| ID | 1221504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2862732 |
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| End bp | 2867012 |
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| Gene Length | 4281 bp |
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| Protein Length | 1426 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637239058 |
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| Product | hypothetical protein |
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| Protein accession | NP_520778 |
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| Protein GI | 17547376 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGCC CGCCCCAGCC CCCTGAATCG CCGAAGTCCG ACGGCGGACA CACCAGCACC
CTGTCCACCA CCCGGGCCGG CGTGCGCGCG GCTGCACCGG AGGCGTGGGC CTGGCTCATG
CAGGGCGCGC GACGCGTCGG GGCGGGCATC GTTGCCGTGG CACGCTCGCC GGCCTGGCGC
AAGCTGTGGC GCCTGCTCTG GAAGACCGCG GCGGCGCTGG CCGTGCTGGC CGTGCTCGGC
ATACTGCTGG TGCGGTTCGT CCTGTGGCCG CGCGTGGGGC TGGCGCGCGA ATGGATGGAG
CGGCAAGCCT CGGTCACCCT GCAGGCCAAG GTCGGCATCG GCGCGCTGGA GACCTACTGG
GAAGGCTGGC ACCCGGCCTT CCGCGCCCAG CGCATCGAAG CGCTCGACGC CGCCGGGCGC
CGGACCTTCG CCGTGCAGGA TGTGCAGGCC CGGCTGTCGT GGCGCTCGCT GCCGCGGCTG
CAGATCACAT TTGCCGTCCT GCATGCCAGC CAGGCCGACG TGCTGGTCCG GCGCGACGCC
ACGGGCGCGC TGTCCGTGGC CGGCATCAAG GTCGAGCCGA GCGCCGGCAG CGACGGCACC
TTCTTCGACC AGCTGCTGTC CCAGGGCGAC ATCGACTTCC GTGACGGCGC GGTGCGCTGG
CTCGACCAGC AGCATGGCCT GCCCGAAGCC GCACTGGGCA ACGTCCGCCT GCACCTGCGC
AACGGCCCGA CCCGCCACCG GCTGGACGCC AGCGCCACCT CGGCGACACT GTTCAACGGC
CCCATCAAGC TGCGCGCCGA TTTCCGCCAC GACCTGCTGG CCCGTCCCGG CGATTGGCGC
CATTGGCACG GCCAGGCCAA CTGGCAGGTC GACGCGCTGC GGCTGGCGAC CCTGCAGCGC
TATCTGCCGG TCCTGGCCTC GGCCACCGGC GGCACGCTCA CGTCCGACGG CTCGGTGGAG
TTCTCGGGCG GCACGCTCAC CCGCGGCCAG GCCCGCCTGA CCGGCCAGCA GATCGATCTC
CAACTGCGGC AGGACCTGGA CCCGATCCGC CTGCGCAGCC TACAGGTGCT GGGTTCGCAC
CAGCGCAGCG CCAGCGGCGA GCACACGCTG CGCCTCGAGA CGCTGCAATG GCTGCCGCTG
TCGCCGGCCT CGCCGCAGGC GGTACCGCTG CCGGCGCCCG CGCAGGCCAC GCTGGCGGGC
CCCACGCTCG AAGCGCCGGC CAACCCCGCC GGCACCCCGC GCGGCTTGCG CAACGTCACG
GTCGGCTGGG CGGTGGATGC GCACGCGGCA CTGCGCCGCC TGCAGGTCAA GGCCGCCACA
CTCGATCTCG CCGACGTGCG CGCCATCGCT ACCGCCCTGC CGCTACCGGC CGACGTGCTC
GATCCGCTGC GCAGCAAGCA GCCCACGGGC CGCCTCGACG ACCTGGACAT CAACTGGCAG
CGCGACGTCT CGCGCTGGCG CCCGAACAGC CCGGCGCCCG AGCACTACAG CGGACACGGC
ACGCTGCGCC AGGTCTCGTT CGGGCCCGGC CCCCTGCCGG CCGTGCCGCC CGGCCATCAC
CCCGAGCCGG CCGTGCCCGG CGTCGAGAAC CTGTCCGGCA ACGTCGTCTT CTCCGACGAT
AAGGGCACGC TGCGCATCGA TTCCGCCGAC GTCGCGCTGC TGCTGCCCGG CGTGTTCGAT
GAGTCGCGCG TGCCGCTCGA CCGCCTGCAG GGCACCTTCA CCTGGACCCG CCGCCAGCAG
GAACTGGTGG TCAGCAGCGA CAACCTGACG TTCTCCAATG CCGACCTGTC GGCCCGGATC
ACCGGCAGCT ATCGCCACGC GCCCGACACC AGCCACATCG GCGCGGTGGA CCTGAAGGGC
ACGCTGGACC AGGCCATGGT GCCGCGTGTC CCGCGCTACC TGCCGCTGTC GCTGCCGCAG
CATCTGCGCG ACTACCTGTC CGGCGCGCTG CAGACCGGCA CGGCCAGCAA CGTCACCTTC
GTGCTGGCCG GCGATCTGTT CGATTTCCCG TACCGCGCCC CGCACAAGGG CAGCTTCCGC
GTCGAAGTGC CCATCAAGGA CGTGACCTAC CAGGCCGCGC CGCTCGAAGC CGGGCGCAAC
CCGCCGGGCT CGGTCCCGGC CCATCCGGGC GGCTGGCCGT CCTTCACCGG CATCGAAGGA
ACAGTGGTGT TCGACAAGCC GTCGCTGTCG TTCAAGGTGG CGCGCGCCAG GGTGATGGGC
GTGAACCTGA CCGACGTGAC CGGCAGCCTG CCCGACATGG GCTCCGCCCA GCCGCTGCTC
GTCATCGACG GCCACGCCGA CGGCGCCACG CAAGGCTTCC TGCAATACGT CGAGGCCAGC
CCGGTAGGCG AATGGATCGG CCACTTCACC CGCGAGACGC GCGCGCAGGG CAACGCCACG
CTGGCGCTCA AGCTCGAACT GCCGCTGCAC GAAATGCATG CGACACGCGC GCAGGGCAGC
GTCGGCTTCC TGCACAACGA CGTCACGCTG ATCCCGCAGG CGCCGCCGCT CGCCGACGTG
ACGGGCACCC TCACCTTCAC GCAGCGGGGC ATCGGCTTCG ACAACCTGCG CGCGCGCTTC
GCCGGCGGCG AGATCCGCCC GACCGGTGGC ACGCTGCCCG ACGGCACGAT CCGCATCCAG
GTGGCCGGCA CCGCGTCGGC GCAAGGGCTG CGCGACACCA CGCCGGCCGA CAGCGCCGTC
GCCGCGGTCG CGCGGGCGCT GGACGGCAGC GCGCCCTACA GCGCCACCAT CAGCGTCAAG
CAGCGCCGCG CGACCGTGCT GGTGCAATCC GACCTCACGC CGATGACGGT GCGCCTGCCC
GCGCCGCTGG CCAAGGCGGC CGGCCAGCCG CTGCCGGTGC GCTTCGAGAT GCGTCCTGCG
GCCAACGGCA ACGCCGCCGA CATCGACGAG GTCCTGCTGC AGCTCGGCAA CGTGGTGAAC
GCGCGCTACG AACAGCGCAG CAGCGCCAGC GGCACCGAAG TGCTGCGCGG CGGCATCGGC
GTGCGCCAGC CCGTGCCGCA GCCGGCCGAT GGCGTACTCG CCGCCATCGC GCTGGACCGC
CTGGACATCG ACGCCTGGCG CCAGGTCTTC GCCGCGCCGG CGGCAGCAGC GGCGGACAAG
AGCGCCGGCA CGGCCGCCGC AAGCCCGGCA CGCGGTAATC CATACCTGCC GACCCGCCTG
GCGGGACGCG CGCAGGCACT ACGCATCCTC GGCCGCGATT TCAACGCCGT CAGCGTGGAC
GCCTCGCGCG ACGGCGCCAA CTGGCAATCG ACCATCGACT CGCGCGAGAT CGCCGGCACG
GCGCGCTGGC ACGCCGAAAG CGCCACGGTG CCGTTCGGCG AGCTGACCAT GCGGCTGTCG
CGCATGAGCA TCCCCGATGC CCGGGAAGAG AGCGCGCTGA CCGAATCGCT GGCGCGCAAC
ACGCAGGAAA TCCCGTCGCT CGACTTGGTG GCCGACAGCT TCGACCTGCG CGGCAAGCCG
CTCGGCAGGC TCGAACTGAA AGCGCGCAGC CAGATCAGCG ACGGCGCGCC GGTGTGGACG
CTGGAGACGC TGAAGCTCGA CCAGCCGGCC GCCACGCTCA CCGCGCAGGG CACCTGGCGT
ATCCCGCGCC GCCTGCGCGG CAGCGACGAT CCCGAACGCC GTACCCTGCT CGACTTCCGC
CTCGACCTGC GCAACTCCGG CGAACTGCTG CAGAAGATGG GCTTCGCCAA GGTGCTCGAC
GGCGCCCGCG GCACGCTGGA AGGCCGCGTC GTCTGGCGCG GCTCGCCGAT GTCGCTCGAC
CTGCCGTCGC TCAACGGCCG CATGGCGCTG AACCTGGAGC GCGGCCAGTT CCTGCCGGTC
GATCCGGGCC TGGCCAAGCT CGCCGGCGTG CTCAGCCTGC AGGGCCTGCT GCATTTCGCC
ACCGATCTGC GCGGCGCCAC CGGGCGCGGC ACGCCGTTCG AGAGCGTGGC CGCCACCGGC
ACCATCGCCA GCGGCATCGC CCGCACCGAC GACTTCGCCG TGAAAGGCCC GCAGTTCCAG
GTGGCGATGC AGGGCTCGGC CAACATCCTC GAGGAGACGC AGGACCTGCG CGTGACCGTC
ACCCCCAAGG TGGACGCCAC CTCGGCATCG CTGGCGGCGG CGTTCATCAA CCCAGCCATC
GGGCTGGGCA CGCTGGCGGC GCAGCTGATC CTGGGCGACC AGATGTCCAA GGCGTTCGCC
ACCCAATACC GCGTCACCGG CAGCTGGGCC GACCCGAAAA TCGAGAAGGC CAGCAGCGGC
GGGCAAACCC CGGCAAAATA G
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| Protein sequence | MQRPPQPPES PKSDGGHTST LSTTRAGVRA AAPEAWAWLM QGARRVGAGI VAVARSPAWR
KLWRLLWKTA AALAVLAVLG ILLVRFVLWP RVGLAREWME RQASVTLQAK VGIGALETYW
EGWHPAFRAQ RIEALDAAGR RTFAVQDVQA RLSWRSLPRL QITFAVLHAS QADVLVRRDA
TGALSVAGIK VEPSAGSDGT FFDQLLSQGD IDFRDGAVRW LDQQHGLPEA ALGNVRLHLR
NGPTRHRLDA SATSATLFNG PIKLRADFRH DLLARPGDWR HWHGQANWQV DALRLATLQR
YLPVLASATG GTLTSDGSVE FSGGTLTRGQ ARLTGQQIDL QLRQDLDPIR LRSLQVLGSH
QRSASGEHTL RLETLQWLPL SPASPQAVPL PAPAQATLAG PTLEAPANPA GTPRGLRNVT
VGWAVDAHAA LRRLQVKAAT LDLADVRAIA TALPLPADVL DPLRSKQPTG RLDDLDINWQ
RDVSRWRPNS PAPEHYSGHG TLRQVSFGPG PLPAVPPGHH PEPAVPGVEN LSGNVVFSDD
KGTLRIDSAD VALLLPGVFD ESRVPLDRLQ GTFTWTRRQQ ELVVSSDNLT FSNADLSARI
TGSYRHAPDT SHIGAVDLKG TLDQAMVPRV PRYLPLSLPQ HLRDYLSGAL QTGTASNVTF
VLAGDLFDFP YRAPHKGSFR VEVPIKDVTY QAAPLEAGRN PPGSVPAHPG GWPSFTGIEG
TVVFDKPSLS FKVARARVMG VNLTDVTGSL PDMGSAQPLL VIDGHADGAT QGFLQYVEAS
PVGEWIGHFT RETRAQGNAT LALKLELPLH EMHATRAQGS VGFLHNDVTL IPQAPPLADV
TGTLTFTQRG IGFDNLRARF AGGEIRPTGG TLPDGTIRIQ VAGTASAQGL RDTTPADSAV
AAVARALDGS APYSATISVK QRRATVLVQS DLTPMTVRLP APLAKAAGQP LPVRFEMRPA
ANGNAADIDE VLLQLGNVVN ARYEQRSSAS GTEVLRGGIG VRQPVPQPAD GVLAAIALDR
LDIDAWRQVF AAPAAAAADK SAGTAAASPA RGNPYLPTRL AGRAQALRIL GRDFNAVSVD
ASRDGANWQS TIDSREIAGT ARWHAESATV PFGELTMRLS RMSIPDAREE SALTESLARN
TQEIPSLDLV ADSFDLRGKP LGRLELKARS QISDGAPVWT LETLKLDQPA ATLTAQGTWR
IPRRLRGSDD PERRTLLDFR LDLRNSGELL QKMGFAKVLD GARGTLEGRV VWRGSPMSLD
LPSLNGRMAL NLERGQFLPV DPGLAKLAGV LSLQGLLHFA TDLRGATGRG TPFESVAATG
TIASGIARTD DFAVKGPQFQ VAMQGSANIL EETQDLRVTV TPKVDATSAS LAAAFINPAI
GLGTLAAQLI LGDQMSKAFA TQYRVTGSWA DPKIEKASSG GQTPAK
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