Gene RSc2633 details

Gene Information

• Locus tag: RSc2633
• Symbol: pabB
• ID: 1221480
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: -
• Start bp: 2834813
• End bp: 2836693
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 637239034
• Product: putative PARA-aminobenzoate synthetase component I protein
• Protein accession: NP_520754
• Protein GI: 17547352
• COG category: [E] Amino acid transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; [COG0147] Anthranilate/para-aminobenzoate synthases component I
• TIGRFAM ID: [TIGR00553] aminodeoxychorismate synthase, component I, bacterial clade

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.10225
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCGTTGC CAGATGCCGG CGCGCCGTTC GCGCTGCTGG ACGATGCCAC CTCGGCCGGT 
GCGCCATGCT CGCGCTGGTA CACCGGCTAT GCCGGCGAGA TCGTCCGGCC GCCGGGCACG 
CTGGCGGGGC TGGACGATGC GCTGCGCGCG GCCTGGGCCG ACGGTTTGCA TGCGCTGGTC 
CTGGCCCCGT ACGAATTCGG CCGGCCGCTG GTCGGCTTGT TATCGGCCAT GCCGGCGTCC 
GCTCGGTTGC CCGGCCACGA CGGCTGTCTG CGCGTGCTGC TGTTCCGCTC GATGCAGGTG 
CTGTCGGCGG CCGAGGTCGA TGCGCTGTTC GACGCGTGGC CCGAGGCCGG TAGCGCTGCC 
GGCCTGTTCG ACTGTGCGGC CAGCGTCGAC CATGACGCCT ATGTTCACGC CATCGCCCGC 
ATCCAGGACT GGATTGCCGC GGGCGATACC TACGAAGTCA ATTACACGTA CCGCCTGCGC 
ATGACGGCGT TCGGCGCGCC GGCCGCGCTG TATCGCCGCC TGCGCGCGCG CCAGCCGGTG 
CCGTACGGGG CGCTGATCGG ACTGCCGGAA GGCGGGGCAA TCCTGTCGTG CTCGCCGGAA 
CTGTTCTTCT CGCACCGCGC GGGCACCCTC GTCGCGCGGC CGATGAAGGG CACCGCGCCC 
GCCAGCGGCG ATCCGGAAGT CGACCAGGCG CGCGCCGCCG CGCTCGCCGC CGACGAGAAG 
AACCGCGCCG AAAACCTGAT GATTGTCGAT CTGCTGCGCA ATGACCTGGG CCGGCTCGCA 
CGGCCGGGCT CGGTGCGCGT GCCGACGCTG TTCGAGGTGA CGCCGTACGG CAGCGTGCTG 
CAGATGACCT CCACGGTGCA GGCGGAGATT CCGCCCGAAA CCGGCCTGGC CGACTGCCTC 
GCCGCGCTGT TTCCGTGCGG CTCCATCACG GGCGCGCCCA AGCGCCGGAC CATGGAGATC 
ATCGACGCGC TGGAGCCGCA GCCGCGCGGC TTCTACACCG GCGCGATCGG CTGGATCGAC 
GCGCCCAGCG GCGATCGCGC GATGGGCGAC GCATGCTTTT CCGTGGCGAT CCGCACGCTG 
GTGCTGGGGG CGCCCGGCAC CGACGGCCTG CATTCGTGCG AGCTCGGCAT CGGCTCCGGC 
ATCGTGCACG ACAGCGCCGC CGACGAGGAA TACGCCGAGT GCCGGCTGAA GGCGCGCTTC 
GTCACCGCGC TCGATCCGGA CCTGTCGCTG TTCGAGACGA TGCGGGCGAC GCGCGCCGAA 
GGCGTGCCCT TGCTGGAGCG GCATCTGGCG CGGCTGGCGC ATTCCGCCCG TGCGTTCGGC 
TTCGGTTTCG ACAGGGATGC GCTGGTGCGC GAGGTGGCGC GCGCGTGCGC CGCGCTGCCG 
GAGGCCGGCG CCCACCGCAT GCGCCTGTCG CTGCGGCACA GCGGCGCATT CAGCGTCACG 
GCGGCGCCGC TGCCGCCGCT GCATGCCAGC TGGAATGCGC CGGTGCGCCT GCGCGTCGCG 
CCGCAGGCAC GCGAGGCCGC GCACAGCCTG CCCCATCACA AGACCAGCCT GCGCGCCGCC 
TATGACGCAG CCTGGCAGGC CGCGGAGCGC GAGGGCGCGT TCGATGCCGT GTTCTTCAAT 
GCCGACGGTA CCCTGGCCGA GGGCGGCCGC AGCACGGTGC TGGTCAAGCT GGAGGGGCGG 
TGGTGGACGC CGCCGCTGTC GGCCGGCGTC CTGCCGGGCG TGATGCGCGC CGTGCTGCTG 
GAGGACGCGC GGCCGTGGCT CGGCGCGCCC TTGCATGAAC GCGTGCTGAC CCGTGCCGAC 
GTCGTCCGCG CCGAGGCCAT CGCCGTCTGC AACGCGCTAC GCGGCGTGGT GCCCGCGCAT 
TTCGAGCCGC CCGTCGCTTA G 

 

Protein sequence

MPLPDAGAPF ALLDDATSAG APCSRWYTGY AGEIVRPPGT LAGLDDALRA AWADGLHALV 
LAPYEFGRPL VGLLSAMPAS ARLPGHDGCL RVLLFRSMQV LSAAEVDALF DAWPEAGSAA 
GLFDCAASVD HDAYVHAIAR IQDWIAAGDT YEVNYTYRLR MTAFGAPAAL YRRLRARQPV 
PYGALIGLPE GGAILSCSPE LFFSHRAGTL VARPMKGTAP ASGDPEVDQA RAAALAADEK 
NRAENLMIVD LLRNDLGRLA RPGSVRVPTL FEVTPYGSVL QMTSTVQAEI PPETGLADCL 
AALFPCGSIT GAPKRRTMEI IDALEPQPRG FYTGAIGWID APSGDRAMGD ACFSVAIRTL 
VLGAPGTDGL HSCELGIGSG IVHDSAADEE YAECRLKARF VTALDPDLSL FETMRATRAE 
GVPLLERHLA RLAHSARAFG FGFDRDALVR EVARACAALP EAGAHRMRLS LRHSGAFSVT 
AAPLPPLHAS WNAPVRLRVA PQAREAAHSL PHHKTSLRAA YDAAWQAAER EGAFDAVFFN 
ADGTLAEGGR STVLVKLEGR WWTPPLSAGV LPGVMRAVLL EDARPWLGAP LHERVLTRAD 
VVRAEAIAVC NALRGVVPAH FEPPVA