Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2632 |
Symbol | |
ID | 1221479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2834171 |
End bp | 2834857 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637239033 |
Product | ABC transporter ATP-binding protein |
Protein accession | NP_520753 |
Protein GI | 17547351 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0326334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.746701 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACCT CGCCCCGCCC CCTGATGGTG TTCGAACAGC TGCACTGCCG CCACGGCGAG CGCCTGCTGT TCGACATTCC GCGCCTGGCG CTGTCGGCGG GCAACGCGGT GGTCATCACG GGCGCCAACG GCGTCGGCAA GACCACGCTG CTGCGCATGC TGGCGGGCCT GGTGCCGGCG GCGGAAGCCT GCGTCGATTT CGGCCGGGGC CCGCAGCCGC TGTCCCCTTA CCCGGCCGCG CTGCGGGCGC GGCTCACCTA TGTGCACCAG CATCCGTACC TGTTCCGCAC CTCGGTGCGG GACAACCTTG CCTACGGACT GACCACCGGC CCGCATCGCG TGCCGCGGGC GGAGTTGCGC GAGCGCGTCG ACGATGCCAT CCGCTGGGCC GGCCTGCAGC AGGTGCTGCA TGTGCCGCCG GAGCGCCTGT CGGGCGGCGA GGCGCAACGC CTCGCGCTGG CGCGTGCCCG CGCGCTGCGC ACCGATGTGC TGCTGCTCGA TGAGCCCACC TCCAGCCTGG ATGGCGCCGC GCGCGAACAG GTGCTCGCGC TGGTCGGCGA ACTGGCGGCC GAGGGCCGCG CGCTGCTGAT GGTGTGCCAC GACCGCGAGC TGATCAACCT GCCCGGCGTG ACCCGGTGGA AGCTAAGCGA CGGGCGGCTC GAAATGCGCG GGCACCACGC CGCGTAG
|
Protein sequence | MTTSPRPLMV FEQLHCRHGE RLLFDIPRLA LSAGNAVVIT GANGVGKTTL LRMLAGLVPA AEACVDFGRG PQPLSPYPAA LRARLTYVHQ HPYLFRTSVR DNLAYGLTTG PHRVPRAELR ERVDDAIRWA GLQQVLHVPP ERLSGGEAQR LALARARALR TDVLLLDEPT SSLDGAAREQ VLALVGELAA EGRALLMVCH DRELINLPGV TRWKLSDGRL EMRGHHAA
|
| |