Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2608 |
Symbol | |
ID | 1221455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2810442 |
End bp | 2811212 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637239009 |
Product | hypothetical protein |
Protein accession | NP_520729 |
Protein GI | 17547327 |
COG category | [S] Function unknown |
COG ID | [COG5419] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.245764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATC GCAGCGCCGA ACACTGGTAT CCGACAGCGG CCTATCTCTA CGTTCTGCAC CTTGACGGCC CTGCGCTGGC GTGGGAATAC CTGCGCCGAA ATCCCGACTA CCGCCGCGAC TGGCTGCGCC GTCGCCGCCG GCCGGACGCA GCGCAGGTTT GGGGCTTGCG CCTGCTGGAA GACCCGGCCC TGGATGCGCG TGACGCGCAT CCGGCCTGGT TCCCCGATCA CGATGCCGTG GTGCAGCTCT ACCCCGATGC CGACCCGCCG CCCGAAGCTC ATGCCTTCGA GTTCTGGCGC GTCCCTGGCC GCAAGCAACT GATCCACGAC GGCAAGCGCC TGGTGCTGGT GTCGCATTGG CCCGGCTGCT GCCTGCGGCT CGCGCTCGCG CCGGGCCTGG AAGACGGCAT GGCCTACCTC TACGCCACCC GCGCCTGCGC CACGCCCTGC GCGCGCTATC GCACGCTCAC GGCCGAGCTG GACGCTTTGG CCACCGCGAC GGTTGCCGCG CCTACGGCGG CGGCCCGCTC CCGGCCCACG CTGGCAGCGG TGCTGGAGCT GCACACCTTG CAGGCTCTCG ATGCGACCCT GGCGGGTGCG TCGTTGCGCG AAGTGGCCGT AGGGTTGTTC AGCGCTGATG CCGTCGCGGC CGACTGGCAC AAGGACAGCG CCTTGCGTGC CCGCGTGCGG CGGCTGGTGC GGCGCGGCGA GGCGCTGATG CGCGGCGGCT ATCGCCGCCT GGCACAGCTT CCGCTGCTGC CGTTGCAGTA G
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Protein sequence | MTDRSAEHWY PTAAYLYVLH LDGPALAWEY LRRNPDYRRD WLRRRRRPDA AQVWGLRLLE DPALDARDAH PAWFPDHDAV VQLYPDADPP PEAHAFEFWR VPGRKQLIHD GKRLVLVSHW PGCCLRLALA PGLEDGMAYL YATRACATPC ARYRTLTAEL DALATATVAA PTAAARSRPT LAAVLELHTL QALDATLAGA SLREVAVGLF SADAVAADWH KDSALRARVR RLVRRGEALM RGGYRRLAQL PLLPLQ
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