Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2596 |
Symbol | |
ID | 1221443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2800779 |
End bp | 2801369 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637238997 |
Product | hypothetical protein |
Protein accession | NP_520717 |
Protein GI | 17547315 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC CATCCAAGAG CGCTCTGATT CTCATCGAAT ACGTCAACGA CTGGCTTTCG CCGAGCGGCG GCATCTATCC GTCGTTCCAG GACCGCGAGC AGGTCGACAC CGCGATCGCC AACTCCAAGA TCGCGCTCGC CGAAGCCCGC CGTCGCGGTA TGCACGTGAT TCACGCCTCA CTGAAGTTCG AGCCCCAGTT CAAGGTGCTT GGCGAAGGCA AATATGGGCT GCGCAAGATG ATGCGCGACT ATCAGTCGTT CCTGGGCGAG CAGGCAGACT TCTTCCCCGG CTTCGAGCCC GCAGACGGCG AGTTCGTAGT CCGAGAGCGC GGCGGCGGAA GCAGCGTCTT CGTTGGAACC ACGCTGGACA GCTATCTGCG CAACAACCGC ATCTTCGACA TCTATCTCGC CGGCTTCTCG CTGCGCCAGT GCGTCGAATC CTCGATGCGC AACGCTCACG ACCTCGGCTA CAACACCAAC GTCATCTACG ATGCGTCGGC CGGCTACACC CGCAAGCAGC AGGACGACTT CGTGGCGGAG ATCGCCCCTT TCTACGCCAA CGCCATCACC ACGCAGGAAT TCGTGGCGTA G
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Protein sequence | MTDPSKSALI LIEYVNDWLS PSGGIYPSFQ DREQVDTAIA NSKIALAEAR RRGMHVIHAS LKFEPQFKVL GEGKYGLRKM MRDYQSFLGE QADFFPGFEP ADGEFVVRER GGGSSVFVGT TLDSYLRNNR IFDIYLAGFS LRQCVESSMR NAHDLGYNTN VIYDASAGYT RKQQDDFVAE IAPFYANAIT TQEFVA
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