| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2590 |
|---|
| Symbol | |
|---|
| ID | 1221437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2796232 |
|---|
| End bp | 2796618 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637238991 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_520711 |
|---|
| Protein GI | 17547309 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4308] Limonene-1,2-epoxide hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.733031 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACCC CACTCGAAAC TGTTTCACAT TTCTGCGCGG CGTTCGTCGA AGACGGCGGA
AGGCCAGCCG TGCGTCGCTG GTTCACACCT GACACCCGCT GGGTCAACGA GGGCGTATCC
GCTACGACGG GAGTCGATGA GGCCATTGCC ATGATCGACG GACTGGAGAC ATCGATGGGT
ATCTCGACGG TCCATTTTGA TGTAATCGCG ATTGCTGCCG ACGGATCTCG TGTACTTACC
GAAAGGGTCG ACCGCTTCGA GCGGGCCGAC GGCGCCGAAA TCGGACGCGT GACCTTGATG
GGAATCTTCA AAGTGGAGGG CGAGAAGATT GTCGAGTGGC GAGACTACTT CGATGTCAAC
GCCCTTCAGG CGTTCAATGC CGGCTAA
|
|---|
| Protein sequence | MPTPLETVSH FCAAFVEDGG RPAVRRWFTP DTRWVNEGVS ATTGVDEAIA MIDGLETSMG
ISTVHFDVIA IAADGSRVLT ERVDRFERAD GAEIGRVTLM GIFKVEGEKI VEWRDYFDVN
ALQAFNAG
|
|---|
| |