| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2547 |
|---|
| Symbol | aac |
|---|
| ID | 1221394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 2754482 |
|---|
| End bp | 2756869 |
|---|
| Gene Length | 2388 bp |
|---|
| Protein Length | 795 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637238948 |
|---|
| Product | aculeacin A acylase transmembrane protein |
|---|
| Protein accession | NP_520668 |
|---|
| Protein GI | 17547266 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2366] Protein related to penicillin acylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCACG GATTCGCACT GCGCAACACG CTCGCCGTGG CCGCGCTCGC AGCGCTGGCC
GGCTGCGCGG GCACGGCGCA CGGCAGCCGT TGGGACACGC CGTCCGACAC CGGCCTATCG
GCCGAGATCC GCCGCACCGG CTTCGGCATT CCGCACATCC GCGCCAACGA CTACGCCGGC
CTCGGCTTCG GCATGGCCTA TGCCTATGCG CAGGACAATC TCTGCCTGCT CGCCGACCAG
GTCGTCACCG TCAACGGCGA GCGCGCGAAG ACGTTCGGGC CGGACGGCAC CGCCACCGTG
TCGTTCAAGT CCATCCCCAA CACTCGCTCG GATGCGTTCT TCAAGGGCAT CGTCGATGCG
GCCGCGCTGC GTGACGGCTA TGCGCGGATG TCGCCCGAGG CGCGCGAACT GCTGCGCGGC
TACATCGCCG GCTACAACCG CTACCTGAAG GACACCCCGC CGGCCGACTT CCCCGCCGCG
TGCCGCAACG CCGCCTGGGT GCGCCCGCTC ACGCTGGCCG ACATGATGCG CATGGGCGAG
GAGAAGGCGA TCCAGGCCAG CGCCGGCGCG ATGCTGGCCG GCATCGTCGA TGCGCAGCCG
CCGGGCCGGG CGCCCGTGAC CCATACGGTG GTCCCGCCGC ACGCCGTCGA TGTCGCCGCG
CTCGACCGCG AGCTGCGGCT GCGCGACCTG CCCATCGGCA GCAACGGCTG GGCCTTCGGC
AGTGCCGCCA CGGAGAACCG GCGCGGCGTG CTGCTCGGCA ACCCGCACTT CCCGTGGACG
ACCACCAACC GCTTCTACGA AGTCCACCTG ACCGTGCCCG GCAAGCTCGA CGTGATGGGC
GCGTCGATCG CCGCCTTCCC CGTCGTCAGC ATCGGCTTCA ACCGCGACGT GGCGTGGACC
CACACGGTCT CCACCGGCCG CCGCTTCACG CTGTTCGAGC TCAGGCTAGC CGAGGGCGAC
CCCACCACCT ATCTGGTCGA CGGCACGCCG CACAAGATGA CCGCGCGCAC GGTCGCCTTC
GACGTGAAGC TGCCCGACGG CCGCATCGAG CGCCGCGCAC ACACCTTTTA CGACACCGAA
TACGGCCCGG TGGTGTCGAT GCCCGCCGCC GGCATGCCGT GGACCACGCA GAAAGCCTAT
GCGCTGCGCG ATGCCAACCG CGGCAACACG CGCATGATCG ACGCCTGGCT GCACATCGCG
CAAGCCGGGG ATGTGGCCGG CATCCACCGG GCGATCGGCA ACCTGGGCAT TCCGTGGGTC
AACACCATCG CCGCGGACCG CAACGGCCGC GCGCTGTTCG TCGACGTGTC GGCCACGCCC
GACGTCTCGG CCGAGACACT CAAGCGCTGT GCCCCGTCGC CGCTGGCCGA GCGGCTGTTT
AAAGGCGCCG GCCTGGTGCT GCTGGACGGC GCGCGCAGCA CCTGCAACTG GCAGGTCGAT
CCGGCCTCGC CGGTGCCGGG GCTGATCGCG CCCGCGCGCA TGCCGGCGCT CGAGCGCGAC
GACTTCGTCG CCAACAGCAA CGACAGTTCG TGGCTGACCA ACCCGGCGCA GAAGCTCACC
GGCTTCCCGC CGATCATGGG CGAGACCGAC GTGCCGCAGC GCCTGCGCAC CCGCATCGGC
CTGATCGAGA TCGGCCGCCG CCTGGCCGGC GCCGACGGCC TGCCGGGCAA CCGCATCGAC
CTGCCGAACC TGCAGGCGAT GCTCTTCCGC AATACCAACC TCGCCGGCCA CCTGGTGCTG
GGCGATCTGC TCGAAGCCTG CAAGGCCGCG CGCGACGCCG ATGCCGACGT GCGCAACGGC
TGCGTCGCCC TGGGCCGGTG GAATCGCACC GCCGCCGCCA ATGCCCGCGC CGCCCACCTG
TTCCGCGAGT TCTGGATGCG CGCCAAGGAC ATTCCGCAGG TCTACGCCAC CGACTTCAAC
CCGGACGACC CGATCTACAC GCCGCGCGGC CTGCGCATGC ACGACGCGAC CGTACGCGCC
ACCGTGTTCA AGGCGCTCAA GGACGCGGTG GGCGCGGTGC GCGCGGCCGG CTTCGCGCTG
GATGCCCCGC TCGGCACCGT GCAGGCGGTG CGCCTGCCGG ACGGCGACAT CGCGCTGCAT
GGCGGCGAGG AGTACGAAGG CGTGCTCAAC AAGCTGCAGA GCCTGCCGAT CGGACCGCAG
GGCCTGCAGG TTGACGAGGG CACCAGCTAC GTCCAGACCG TCGGCTTCGA CGCTCAGGGC
CCCGTCGCGC AGGCCCTGCT GGTCTACGGC GAATCGACCG ACCCGGCCTC GCCGCACGCC
TTCGACCAGA TGCGTGCGTT CTCGGCCAAG CGGTGGATCC GCCTGCCGTT CTCGGAGGCC
GCCATCGCCG CCGATCCGGC GCTGAAGGTG ACAAAGCTGT CGCAGTGA
|
|---|
| Protein sequence | MTHGFALRNT LAVAALAALA GCAGTAHGSR WDTPSDTGLS AEIRRTGFGI PHIRANDYAG
LGFGMAYAYA QDNLCLLADQ VVTVNGERAK TFGPDGTATV SFKSIPNTRS DAFFKGIVDA
AALRDGYARM SPEARELLRG YIAGYNRYLK DTPPADFPAA CRNAAWVRPL TLADMMRMGE
EKAIQASAGA MLAGIVDAQP PGRAPVTHTV VPPHAVDVAA LDRELRLRDL PIGSNGWAFG
SAATENRRGV LLGNPHFPWT TTNRFYEVHL TVPGKLDVMG ASIAAFPVVS IGFNRDVAWT
HTVSTGRRFT LFELRLAEGD PTTYLVDGTP HKMTARTVAF DVKLPDGRIE RRAHTFYDTE
YGPVVSMPAA GMPWTTQKAY ALRDANRGNT RMIDAWLHIA QAGDVAGIHR AIGNLGIPWV
NTIAADRNGR ALFVDVSATP DVSAETLKRC APSPLAERLF KGAGLVLLDG ARSTCNWQVD
PASPVPGLIA PARMPALERD DFVANSNDSS WLTNPAQKLT GFPPIMGETD VPQRLRTRIG
LIEIGRRLAG ADGLPGNRID LPNLQAMLFR NTNLAGHLVL GDLLEACKAA RDADADVRNG
CVALGRWNRT AAANARAAHL FREFWMRAKD IPQVYATDFN PDDPIYTPRG LRMHDATVRA
TVFKALKDAV GAVRAAGFAL DAPLGTVQAV RLPDGDIALH GGEEYEGVLN KLQSLPIGPQ
GLQVDEGTSY VQTVGFDAQG PVAQALLVYG ESTDPASPHA FDQMRAFSAK RWIRLPFSEA
AIAADPALKV TKLSQ
|
|---|
| |