| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2544 |
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| Symbol | xerD |
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| ID | 1221391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2752033 |
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| End bp | 2752959 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637238945 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | NP_520665 |
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| Protein GI | 17547263 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGG CCGCCCCCGA AACCCTGCCC CTGCCCCCGA GCAGCACGGA GGCGATCCAG
CGCTTCTGCG ACGCGCTGTG GCTCGAGGAC GGCCTCGCCC GCAACACGCT CGATGCCTAC
CGGCGCGACC TGACGCTCTA CGCGCAGTGG CTCGCCGGGC GCGGCAAGGC GCTCGACCAG
ACCGAGGACG TCGACCTCTC CGACTACTTC GCCGCCCGCC ACGAAGACAG CCTCGCCTCC
ACCGCCAACC GGCGGCGCAC GGTGTTCAAG CGCTTCTTCC AATGGGCCTT GCGCGAGCAC
CTGGTCAGCG CCGACCCGAC GCGCCTGCTG TCGACCGCCA AGCAGCCGCC GCGCGTTCCC
AAGACGCTGT CCGAGGCGCA GGTCGAGGCG CTGATCGCCG CGCCCGATGT CGACGCCCCG
CTCGGCCTGC GCGACCGCGC CATGATCGAG CTGATGTATG CGAGCGGCCT GCGCGTGTCG
GAGATCGTCG CGCTCAAGAC CGTCGAGGTC GGCCTGAACG AGGGTGTGGT GCGCGTGATC
GGCGGCAAGG GCGGCAAGGA CCGGCTGGTG CCGTTCGGCG CCGAGGCCGG CGACTGGCTG
CGGCGCTACC TGCGCGACGG CCGCACCGCG CTGCTGGGCG AGCGCACCGC CGATGCGCTG
TTCGTCACCG CGCGCGGCGA CGGCATGACG CGCCAGGCCT TCTGGTACCT GATCAAGCGC
TATGCCCAGC GCGCCGACAT CCACGCGCCG CTGTCGCCGC ACACGCTGCG GCACGCCTTC
GCCACGCACC TGCTCAACCA CGGCGCCGAC CTGCGCGTGG TGCAGATGCT GCTCGGCCAC
GCCGACATCT CCACCACGCA GATCTACACC CATGTCGCGC GCGAGCGGCT GCGCACCCTG
CATGCACAGC ACCATCCGCG CGGATAG
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| Protein sequence | MTQAAPETLP LPPSSTEAIQ RFCDALWLED GLARNTLDAY RRDLTLYAQW LAGRGKALDQ
TEDVDLSDYF AARHEDSLAS TANRRRTVFK RFFQWALREH LVSADPTRLL STAKQPPRVP
KTLSEAQVEA LIAAPDVDAP LGLRDRAMIE LMYASGLRVS EIVALKTVEV GLNEGVVRVI
GGKGGKDRLV PFGAEAGDWL RRYLRDGRTA LLGERTADAL FVTARGDGMT RQAFWYLIKR
YAQRADIHAP LSPHTLRHAF ATHLLNHGAD LRVVQMLLGH ADISTTQIYT HVARERLRTL
HAQHHPRG
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