| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2470 |
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| Symbol | |
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| ID | 1221317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2678417 |
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| End bp | 2681089 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637238871 |
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| Product | rhs-related protein |
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| Protein accession | NP_520591 |
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| Protein GI | 17547189 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAG TCCTTGAGTG GCAGCTATGC ACTGCTTTCG TCGCAGCGGC TAGGCGTCAA
GCGAAACTTG GTTTGAAGAG CGCGCAACTC GGTGTGGCGA TAGCGCTGTT TGCTTGTGCC
GTGCCACCTG CCTGGAGCGC TAATACTGGC GCCGACGGGC ATGTTTGGAG AGCAGAAAAC
AATGGCGAGT GGTGGGGGGC TGGCGATAGT CCGGATGCTG CCTGCCGTTC AGCGACCGCC
GGGATCAAAG CTCGGTACCC GTGGGATACG CGAGAATATC TCTACCTTGA AAATAAGCAA
ATCGATGTAG ACGGTACCGC AGGCTGCGTC GGGCGATTCA GCAATGGCGT CATCGGGATT
ATTGGGACGA CGGTACGAAT CGCTCAATGC GCAGCAGGCT ACGTGACACA GCCTGACGGT
TCGTGCATAC CGAAAAATCC CGAAGTAAAG ACCTGCGCTG TAAGCCACCC GGTGTTCCCG
AACACGGGTG TGAAGGTACT GATCGAACGA GACGACATAG GCAGTACCGA CTTACCCATA
TCGCGTGCGT ATCGATCGTC AGTGCTTTTC GGTCTGGTCG CCGGTGTGGG CCAATGGTTG
TTCAACTGGC AGCGAGAGTT GGACGCTCCC ATCGGCACCG CTGATACAAC GTCCGCTGCG
ATCGCCGCGA TCCGCGAGGA CGGCACCTCG CGCATTTTTC GCAAGAGCGG CAATGCTTGG
ACGACGTTCG GCTCCCGAGA CACGCTGGCC CGTCTCTCCG ATGGAGCCGG CACACTTACT
GGCTGGCAAT ACACCGTAGC CGGGACAGAC GCGGTGGAAA CCTACGGTAC GAATGGAAAG
CTGTTGTCGA TTCGGGAGCG CAACGGTAGA ACCACGACAC TGACATACAA CGCCAGCAAT
CAACTCATCA AGGTTATAGC GGCAACGGGC CGCAGCCTCA CTTTTGCGTA TGACGCACAA
GGGCGAATCA TTGGTGTCAC GGCTCCCGAT GGGGCGATCA CCCAGTACGC GTACAACGCC
AACGGTATGC TGTCCACCGT CATCTGGACA GATAACACCA CACGCCAGTA TGTCTACGAG
GACACTCGTT TTCCAACCGC CCTGACTGGC GTGATCGACG AAGCTGGCGT GCGGTATGCC
ACCTACACCT ATGACGACCA GGGCCGGGCC ATCACGAGTG AGTTGACCGG CGGGGCAGAT
CGGTACCAGT TCCAGTACCA ATCGGATGGG CAAACGACAG TTCTGATGCC GGACGGCGGC
AGCAGCGTCT ACGGGTTCCT AAAGCAGAAC GGCGTCCTAT TGCCGAGGGG AACGAGCGCG
TCTTGCGCTC TGTGCGGCAG CTCCGCACAG AGCGCGGACT ACGACGCCAG CGGCAATGCA
ACGCGCAAGG TCGGCTATGA CGGTACGGTG ACGACGTATG CCTATGACTC TCTGGGCCGG
CAGCTGCAAC GTGTTGATGC GGTAGGGACT GCAAACGCGA CAACGCTCAC AACGGAATGG
CATCCCACTT GGAATTTGCC CGTTAGGGCC GCTTCACCCG GCAAGTTGGA GACGTTCACC
TACGATACGG CTGGCAATCT CGTGTCCTAC ACCACCGTGG CGACGAATGA TGCCAGTGGG
TCTGCTGGAT TTGGTGCAGC GCCAACGGGG GATGTGATCA AAACGGACTG GACATACGAT
AGCGCTGGTC GGCTGATGAC CGCGTACGAG TTGACTGGCG CCGCAGCCAC GGGTTCATGG
GCTTTGACCT ATGACGCCCA GGGTAACGTA CAAACGTTAA CCGATCCGGA TGGCCGAACG
GCCACCGCCG TAAAGTACGA CGCCGCAGGC AGGTTGCTGG AAGCAGTCAA TACGGATGGC
GAGCGGACGA AATACAGCTA CAACGCTCGC GGTTTGCTTC TGACCTATGC CGTCGGCGGC
GCCGTCGTGA ACTATGACTA CGATGCCAAC GGCCTGCTCA CTGCTATTCG TGGCCCCGGA
GACTACTACT TTGGCTTTAA GTACGATACC GCTCACCGCT TGATTTCGCT TCTGACTCCA
GTAGGGCAGA CGTCTCTGGT CAGCATGGCG AATCCTGTTC AAGCCGCTAA GCTCGCGGCG
CGTGCGGAGG TTCAGCGCAC GGCAAAGTTG TCGGTGGTTG AGCGTTTGTG GATCACAATC
AAATCGTGGT TGTCCAGATT GCTTGGCCTT GTCGTTGGGA ACGCCACCGC GAACCCACTG
TTGGGTGAAA TCCAGGTGGT GCCTCCCATC CCAGCGCAAG TTGGCGGAGC GATTGGTGGC
ACGAGCAGTG GTAACTCAGA TTTGGACGAG TTGCTGGGTA CCGGCCGCCC GATGCCTCGA
CCTGACCCAC TGCTCAACGA GTTCATCAAG ATGGTTCGAA ACATCACTGG TGCAAATCAG
CGTACCAGTG AGGCTTGTGA GGATGATTCG AGGTGCCAGT CAGCGAAGCA AGATGCGTCA
AGTCATTACT GGACTTTGAC TCAGAAACGC ATTCCTCAAT ATCTAAGCGG GGGTACTGGG
GGGCACGATG TGGGGCATTA TAATGCTATT ATTCAGCGCC AAATCGGTCT TAGGAAGGCA
ATTAATAAGG TCAAGCTATA CTGTCGCCCC TTGCCTGTCG AGCTTCCGGA ATGGGAGCGT
GTTGCAAATC AAGAAATCCC CATTCTTCAT TGA
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| Protein sequence | MKIVLEWQLC TAFVAAARRQ AKLGLKSAQL GVAIALFACA VPPAWSANTG ADGHVWRAEN
NGEWWGAGDS PDAACRSATA GIKARYPWDT REYLYLENKQ IDVDGTAGCV GRFSNGVIGI
IGTTVRIAQC AAGYVTQPDG SCIPKNPEVK TCAVSHPVFP NTGVKVLIER DDIGSTDLPI
SRAYRSSVLF GLVAGVGQWL FNWQRELDAP IGTADTTSAA IAAIREDGTS RIFRKSGNAW
TTFGSRDTLA RLSDGAGTLT GWQYTVAGTD AVETYGTNGK LLSIRERNGR TTTLTYNASN
QLIKVIAATG RSLTFAYDAQ GRIIGVTAPD GAITQYAYNA NGMLSTVIWT DNTTRQYVYE
DTRFPTALTG VIDEAGVRYA TYTYDDQGRA ITSELTGGAD RYQFQYQSDG QTTVLMPDGG
SSVYGFLKQN GVLLPRGTSA SCALCGSSAQ SADYDASGNA TRKVGYDGTV TTYAYDSLGR
QLQRVDAVGT ANATTLTTEW HPTWNLPVRA ASPGKLETFT YDTAGNLVSY TTVATNDASG
SAGFGAAPTG DVIKTDWTYD SAGRLMTAYE LTGAAATGSW ALTYDAQGNV QTLTDPDGRT
ATAVKYDAAG RLLEAVNTDG ERTKYSYNAR GLLLTYAVGG AVVNYDYDAN GLLTAIRGPG
DYYFGFKYDT AHRLISLLTP VGQTSLVSMA NPVQAAKLAA RAEVQRTAKL SVVERLWITI
KSWLSRLLGL VVGNATANPL LGEIQVVPPI PAQVGGAIGG TSSGNSDLDE LLGTGRPMPR
PDPLLNEFIK MVRNITGANQ RTSEACEDDS RCQSAKQDAS SHYWTLTQKR IPQYLSGGTG
GHDVGHYNAI IQRQIGLRKA INKVKLYCRP LPVELPEWER VANQEIPILH
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