Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2426 |
Symbol | |
ID | 1221272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2630756 |
End bp | 2631517 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637238826 |
Product | hypothetical protein |
Protein accession | NP_520547 |
Protein GI | 17547145 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTTG CCTATACGCT TTCCGGTCTG CTGGTCGGTC TGACGGGCGT CGGCGGCGGT TCGCTGATGA CGCCGCTGCT GACGCTGATG TTCGGTTTCT CGCCGGCGAC CGCGGTGGGC ACAGACCTGG CGTTCGCGTC GCTGACCAAG AGCGTGGGCA CCATCGCCCA CCGCAATCAT GGCCACGTGC GCTGGGACAT CGTCAAGCTC CTGTGCCTGG GCAGCGTGCC GGCCGCGCTG GTGACGGTTG CCGTGCTGAA GATGGCGGGC AACCTGGATG TGCGGTGGAT GCACATCATC CGCGTGACGA TCGGCGTGTC GGTCATCCTG ACCGTGGTCT CGGTGCTGTT CCGCCAGCGC GTGCTGGGCT GGCTGGCCCG CAATCCGCGC TACCGCTTGC AGGGCTCGGC CCTGGCTATC GCCACAGTCA TGATCGGTTC GGCGCTGGGC GTGCTGGTGA CGGTGTCCTC CATCGGCGCG GGCGCCGTGG GCGCGACGCT GATCCTCATC CTGTATCCTG AATTGAAGTC GGCCGAAGTG GCCGGCACCG ACATCGCCTA TGCGGTGCCG CTGACCGCCG TGGCGGGCCT GGGCCACATG TACCTGGGCA CGATCGACTG GAACCTGCTG GCCTCGCTGC TGGTGGGGTC GATTCCCGGC ATCTGGCTGG GCGCGCGGCT GTCCAAGAAT CTGCCGGAAC GTCTGGTGCG CGGCGCGCTC GCCGCCACGC TGACGGTCAC GGCCATCAAG CTGGTGTCGT GA
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Protein sequence | MTLAYTLSGL LVGLTGVGGG SLMTPLLTLM FGFSPATAVG TDLAFASLTK SVGTIAHRNH GHVRWDIVKL LCLGSVPAAL VTVAVLKMAG NLDVRWMHII RVTIGVSVIL TVVSVLFRQR VLGWLARNPR YRLQGSALAI ATVMIGSALG VLVTVSSIGA GAVGATLILI LYPELKSAEV AGTDIAYAVP LTAVAGLGHM YLGTIDWNLL ASLLVGSIPG IWLGARLSKN LPERLVRGAL AATLTVTAIK LVS
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