Gene RSc2318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2318 
Symbol 
ID1221163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2518321 
End bp2518776 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content58% 
IMG OID637238717 
Producttranscription regulator protein 
Protein accessionNP_520439 
Protein GI17547037 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.623909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTA AGGCGGTGGA GCTGGATCGA CTCGACTGGC GCATTCTCGA GGTGCTACAA 
ACGCATGCGC GCGTGACGAA TACCGAGCTG GGCAAGCAGA TTGGATTGTC GCAGCCGGCT
GTCAGCGCCC GGATCAGGCG ACTAGAGGAG CAAGGCGTGA TCGAAGGCTA CTCGGCAAGA
ATCAACCCCG AGCTGGCCGG TCGTGACATC TCCGCGCTAA TCCGTATACA AACGACTCAC
GCGCAGATCA CGAAGTGCCT GAAGGCCTTC GCGACGATGC CTGAGATCAT CGAGGCACAC
CGGATCACGG GCGACGATTG CTTCATTGTG CGTGCGGTAG TCCAAAGAAT GAAGCAGCTC
GAAACCGTCG TCGACGCGCT GGCCAGATTT GGACCTGTGA CGACCTCGAT CGTATTGGCA
AGCTATCCGC CCAAGGCGAT TGGCGAAATC AGGTAG
 
Protein sequence
MKPKAVELDR LDWRILEVLQ THARVTNTEL GKQIGLSQPA VSARIRRLEE QGVIEGYSAR 
INPELAGRDI SALIRIQTTH AQITKCLKAF ATMPEIIEAH RITGDDCFIV RAVVQRMKQL
ETVVDALARF GPVTTSIVLA SYPPKAIGEI R