Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2318 |
Symbol | |
ID | 1221163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2518321 |
End bp | 2518776 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637238717 |
Product | transcription regulator protein |
Protein accession | NP_520439 |
Protein GI | 17547037 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.623909 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCTA AGGCGGTGGA GCTGGATCGA CTCGACTGGC GCATTCTCGA GGTGCTACAA ACGCATGCGC GCGTGACGAA TACCGAGCTG GGCAAGCAGA TTGGATTGTC GCAGCCGGCT GTCAGCGCCC GGATCAGGCG ACTAGAGGAG CAAGGCGTGA TCGAAGGCTA CTCGGCAAGA ATCAACCCCG AGCTGGCCGG TCGTGACATC TCCGCGCTAA TCCGTATACA AACGACTCAC GCGCAGATCA CGAAGTGCCT GAAGGCCTTC GCGACGATGC CTGAGATCAT CGAGGCACAC CGGATCACGG GCGACGATTG CTTCATTGTG CGTGCGGTAG TCCAAAGAAT GAAGCAGCTC GAAACCGTCG TCGACGCGCT GGCCAGATTT GGACCTGTGA CGACCTCGAT CGTATTGGCA AGCTATCCGC CCAAGGCGAT TGGCGAAATC AGGTAG
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Protein sequence | MKPKAVELDR LDWRILEVLQ THARVTNTEL GKQIGLSQPA VSARIRRLEE QGVIEGYSAR INPELAGRDI SALIRIQTTH AQITKCLKAF ATMPEIIEAH RITGDDCFIV RAVVQRMKQL ETVVDALARF GPVTTSIVLA SYPPKAIGEI R
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