Gene RSc2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2300 
Symbol 
ID1221145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2501336 
End bp2501830 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content68% 
IMG OID637238699 
Productsignal peptide protein 
Protein accessionNP_520421 
Protein GI17547019 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.590033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0335477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACGC TGCTGATCGC CCTGATGCTC GCGTCGATCG CGCTGCTCGC GGGGATGGAC 
GTGTGGGCCC TGCAGCGGCG GCGCCAGCAG GAAGACGCGC TGCTGTTCGT GGGCAACCAG
TACCGGCAGG CCATCGAACG CTACTACCTG GTGGGGCGCA GCCTGCCGAT GTCCATCGAT
GACCTGATCG ACGACAAACG CTTCCCCGTG CCCATGCATC ATCTGCGCCG CGCGTACCCC
GACCCGATCA CCGGGCGCAA CGACTGGGAG CTGCTGCGCG ACGGCACCGG CATCTACGGC
ATTCACAGCC GGTCGGACGG CGTGCCGATC AAGCACGCGA ATTTTCCGGG CCGATACGCG
TTTTTTTCCA ACGCACAGAC CTATGCCGAC TGGGCGTTCA TCTACCCGAT GCCGGGCATG
GGCCGGTCCG CCGCGGGCAG CCTGCCGGGC CTGCCGCCGA GGCTGACCGC CAAGCCGGGC
CGCCCCGCGC GCTGA
 
Protein sequence
MLTLLIALML ASIALLAGMD VWALQRRRQQ EDALLFVGNQ YRQAIERYYL VGRSLPMSID 
DLIDDKRFPV PMHHLRRAYP DPITGRNDWE LLRDGTGIYG IHSRSDGVPI KHANFPGRYA
FFSNAQTYAD WAFIYPMPGM GRSAAGSLPG LPPRLTAKPG RPAR