Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2300 |
Symbol | |
ID | 1221145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2501336 |
End bp | 2501830 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637238699 |
Product | signal peptide protein |
Protein accession | NP_520421 |
Protein GI | 17547019 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.590033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0335477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTACGC TGCTGATCGC CCTGATGCTC GCGTCGATCG CGCTGCTCGC GGGGATGGAC GTGTGGGCCC TGCAGCGGCG GCGCCAGCAG GAAGACGCGC TGCTGTTCGT GGGCAACCAG TACCGGCAGG CCATCGAACG CTACTACCTG GTGGGGCGCA GCCTGCCGAT GTCCATCGAT GACCTGATCG ACGACAAACG CTTCCCCGTG CCCATGCATC ATCTGCGCCG CGCGTACCCC GACCCGATCA CCGGGCGCAA CGACTGGGAG CTGCTGCGCG ACGGCACCGG CATCTACGGC ATTCACAGCC GGTCGGACGG CGTGCCGATC AAGCACGCGA ATTTTCCGGG CCGATACGCG TTTTTTTCCA ACGCACAGAC CTATGCCGAC TGGGCGTTCA TCTACCCGAT GCCGGGCATG GGCCGGTCCG CCGCGGGCAG CCTGCCGGGC CTGCCGCCGA GGCTGACCGC CAAGCCGGGC CGCCCCGCGC GCTGA
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Protein sequence | MLTLLIALML ASIALLAGMD VWALQRRRQQ EDALLFVGNQ YRQAIERYYL VGRSLPMSID DLIDDKRFPV PMHHLRRAYP DPITGRNDWE LLRDGTGIYG IHSRSDGVPI KHANFPGRYA FFSNAQTYAD WAFIYPMPGM GRSAAGSLPG LPPRLTAKPG RPAR
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