Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2295 |
Symbol | |
ID | 1221140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2488478 |
End bp | 2489260 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637238694 |
Product | putative signal peptide protein |
Protein accession | NP_520416 |
Protein GI | 17547014 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGAT TCCATTTTCT GGCACTGGGC TTGACGTGCA CGCTGGCCGC ATCCGCGGCG GCCGGCGCCG CATCGGCAGG CCCGCTCAGC GCGGCGCAGA TCGCGGAACG CAACGTCGCC GCGCGCGGCG GCCTGCAGGC GTGGCGCGCG GTCAATACGA TGGAGATGTC GGGGCAGCTC GAAGCCGGAG GCAAGAAGAA CGCCACGCTT GCATTCGTGA TGACGATGAA GCGCCCGCAC AAGAACCGTC TGGAGATCCG GTTCCAGGGA CAGACGGCGC TCCAGGTCTA TGACGGCGCC CAGGGCTGGA AAGTCAGGCC TTTCCTCGGG CGCGACGAAG TCGACCCGTA CACGCCGGAC GAATTGAAGT CCGCCGCGGC ATCCTCCGAG CTCGATGGCC CGCTCGTGGA CTACGCCGCC AAGGGCACGC AGATTGCCGT CCAGGGTGTC GAGACGGTTG AGGGGCACCG CGCCTACAAG CTGAAGCTGA CCATGAAGGA CGGCGCGATG CGGCACCTGT GGGTCGACGC CTCGACCTTT CTGGAGCTCA AGATCGATGG CGAGCCGCGC AGGCTCGACG GCAAGATGCA TGATGTCGCG GTCTATTTCC GCGACTACCG GATCGAGCAC GGCCTGAAGG TGCCGCACGT GCTTGAAACA GCGGTGCAGG GTGTCCGGCA GACGCACAAG ATCACCATTG AGCGGGTGAC GGTGAATGCG CCGGCAGACG ACGGGCTCTT TGCGAAGCCA CAGCTGGCGA GCGCGCAAAT GCTTCACCAG TAG
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Protein sequence | MTRFHFLALG LTCTLAASAA AGAASAGPLS AAQIAERNVA ARGGLQAWRA VNTMEMSGQL EAGGKKNATL AFVMTMKRPH KNRLEIRFQG QTALQVYDGA QGWKVRPFLG RDEVDPYTPD ELKSAAASSE LDGPLVDYAA KGTQIAVQGV ETVEGHRAYK LKLTMKDGAM RHLWVDASTF LELKIDGEPR RLDGKMHDVA VYFRDYRIEH GLKVPHVLET AVQGVRQTHK ITIERVTVNA PADDGLFAKP QLASAQMLHQ
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