Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2294 |
Symbol | |
ID | 1221139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2487619 |
End bp | 2488455 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637238693 |
Product | hypothetical protein |
Protein accession | NP_520415 |
Protein GI | 17547013 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0795633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGAGAC GGATCGCGGT GTGGGCGCTG GCTGCGTGCC TGTCGGCTTG CGCGGGGGAA ACGGGGCCGG GCGCGGCGGG CATGCCTTCC GTGGCGCAGA TCGTCGCGAA GAACGCCGCC GCGCGCGGGG GCGCGGAGGC CTGGCACCGG ATCGATTCCA TGGTCTGGAT CGGGCACGTG GAAAGCAGCA ACGCGCCCGC GCGCTTCGTG CTGGCGATGC GGCGCCCGAA CAAGACGCGC TTCGAGGTTG TCGCGATGAA CCGGATGGCC CTGCGCGTCT ACGACGGCAC GCAAGGCTGG AAGCTGCGTC CGATGCAGCG CGGCGAGGGG CCGAACGTGC AGCCGTACAC GCCGGACGAG CTCAAGTTCG CGCATGACGA GCAGGTCATC GATGGCCTGC TGATCGATCA TGCGGCGAAA GGCATCGAGA TCGCGCTGGA GGGCACCGAC GACATCGAGG GGCGCAAGGC GTATCGGCTC AATGTCCGGA TGCCCTCGGG CGCAACGCGG CGCGTATGGA TCGACGCCGG CACCTTCCTC GAAGTCAAAT ACGAGCGCGA GACCCGTGGC ATGGCGGGGC AGCCGGTCAA GGTGGCGGTC TACTACCGCA ACTACCAGGC CATCCACGAC GTCACATTGC CGCTGGTCAT TGAAAGCCAC GCCGGGCCGG AGCAGGCCGC CGACAAGCTC GTGATCGACA AGGTGCAGTT CAACCCGACG CTGGACGACA ACCTGTTCGC CCGGCCGGTG GTGGCGGCCG ATCGCAGCCG CTCCGTGCAG GCGCACCCCG ATGCCGGAGC GGCCATCACG ATGCCGCACG GCATGGCGGC ACCCTAG
|
Protein sequence | MMRRIAVWAL AACLSACAGE TGPGAAGMPS VAQIVAKNAA ARGGAEAWHR IDSMVWIGHV ESSNAPARFV LAMRRPNKTR FEVVAMNRMA LRVYDGTQGW KLRPMQRGEG PNVQPYTPDE LKFAHDEQVI DGLLIDHAAK GIEIALEGTD DIEGRKAYRL NVRMPSGATR RVWIDAGTFL EVKYERETRG MAGQPVKVAV YYRNYQAIHD VTLPLVIESH AGPEQAADKL VIDKVQFNPT LDDNLFARPV VAADRSRSVQ AHPDAGAAIT MPHGMAAP
|
| |